RNA–Protein interactions for RNA: ENST00000560352.5

NEO1-209, Transcript of neogenin 1, humanhuman

TSL 4

Gene NEO1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-209ENST00000560352 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
NEO1-209ENST00000560352 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
NEO1-209ENST00000560352 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
NEO1-209ENST00000560352 ABCC9O60706 1549 aa19.01■□□□□ 0.63
NEO1-209ENST00000560352 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
NEO1-209ENST00000560352 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
NEO1-209ENST00000560352 NACADO15069 1562 aa18.44■□□□□ 0.54
NEO1-209ENST00000560352 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
NEO1-209ENST00000560352 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
NEO1-209ENST00000560352 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
NEO1-209ENST00000560352 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
NEO1-209ENST00000560352 SCRIBQ14160 1630 aa17.91■□□□□ 0.46
NEO1-209ENST00000560352 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
NEO1-209ENST00000560352 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
NEO1-209ENST00000560352 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
NEO1-209ENST00000560352 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
NEO1-209ENST00000560352 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
NEO1-209ENST00000560352 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
NEO1-209ENST00000560352 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
NEO1-209ENST00000560352 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
NEO1-209ENST00000560352 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
NEO1-209ENST00000560352 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
NEO1-209ENST00000560352 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
NEO1-209ENST00000560352 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
NEO1-209ENST00000560352 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
NEO1-209ENST00000560352 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
NEO1-209ENST00000560352 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
NEO1-209ENST00000560352 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
NEO1-209ENST00000560352 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
NEO1-209ENST00000560352 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
NEO1-209ENST00000560352 WIZO95785 1651 aa16.89■□□□□ 0.29
NEO1-209ENST00000560352 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
NEO1-209ENST00000560352 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
NEO1-209ENST00000560352 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
NEO1-209ENST00000560352 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
NEO1-209ENST00000560352 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
NEO1-209ENST00000560352 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
NEO1-209ENST00000560352 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
NEO1-209ENST00000560352 NESP48681 1621 aa16.46■□□□□ 0.23
NEO1-209ENST00000560352 CFTRP13569 1480 aa16.45■□□□□ 0.22
NEO1-209ENST00000560352 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
NEO1-209ENST00000560352 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
NEO1-209ENST00000560352 FANCD2Q9BXW9 1451 aa16.34■□□□□ 0.21
NEO1-209ENST00000560352 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
NEO1-209ENST00000560352 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
NEO1-209ENST00000560352 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
NEO1-209ENST00000560352 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
NEO1-209ENST00000560352 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
NEO1-209ENST00000560352 CUX2O14529 1486 aa16.16■□□□□ 0.18
NEO1-209ENST00000560352 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
NEO1-209ENST00000560352 WDR62O43379 1518 aa16.12■□□□□ 0.17
NEO1-209ENST00000560352 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
NEO1-209ENST00000560352 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
NEO1-209ENST00000560352 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
NEO1-209ENST00000560352 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
NEO1-209ENST00000560352 CUX1P39880 1505 aa15.99■□□□□ 0.15
NEO1-209ENST00000560352 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
NEO1-209ENST00000560352 SOGA1O94964 1423 aa15.95■□□□□ 0.14
NEO1-209ENST00000560352 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
NEO1-209ENST00000560352 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
NEO1-209ENST00000560352 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
NEO1-209ENST00000560352 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
NEO1-209ENST00000560352 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
NEO1-209ENST00000560352 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
NEO1-209ENST00000560352 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
NEO1-209ENST00000560352 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
NEO1-209ENST00000560352 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
NEO1-209ENST00000560352 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
NEO1-209ENST00000560352 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
NEO1-209ENST00000560352 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
NEO1-209ENST00000560352 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
NEO1-209ENST00000560352 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
NEO1-209ENST00000560352 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
NEO1-209ENST00000560352 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
NEO1-209ENST00000560352 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
NEO1-209ENST00000560352 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
NEO1-209ENST00000560352 FBLN2P98095 1184 aa15.67■□□□□ 0.1
NEO1-209ENST00000560352 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
NEO1-209ENST00000560352 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
NEO1-209ENST00000560352 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
NEO1-209ENST00000560352 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
NEO1-209ENST00000560352 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
NEO1-209ENST00000560352 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
NEO1-209ENST00000560352 EEA1Q15075 1411 aa15.6■□□□□ 0.09
NEO1-209ENST00000560352 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
NEO1-209ENST00000560352 IGF1RP08069 1367 aa15.59■□□□□ 0.09
NEO1-209ENST00000560352 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
NEO1-209ENST00000560352 FOXD1Q16676 465 aa15.57■□□□□ 0.08
NEO1-209ENST00000560352 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
NEO1-209ENST00000560352 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
NEO1-209ENST00000560352 CUL7Q14999 1698 aa15.54■□□□□ 0.08
NEO1-209ENST00000560352 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
NEO1-209ENST00000560352 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
NEO1-209ENST00000560352 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
NEO1-209ENST00000560352 CHD1O14646 1710 aa15.5■□□□□ 0.07
NEO1-209ENST00000560352 GRIN2AQ12879 1464 aa15.49■□□□□ 0.07
NEO1-209ENST00000560352 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
NEO1-209ENST00000560352 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
NEO1-209ENST00000560352 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
NEO1-209ENST00000560352 NUP160Q12769 1436 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms