RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
CRTC3-209ENST00000560320 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
CRTC3-209ENST00000560320 ABCC9O60706 1549 aa21.1■□□□□ 0.97
CRTC3-209ENST00000560320 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
CRTC3-209ENST00000560320 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
CRTC3-209ENST00000560320 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
CRTC3-209ENST00000560320 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
CRTC3-209ENST00000560320 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
CRTC3-209ENST00000560320 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
CRTC3-209ENST00000560320 NACADO15069 1562 aa19.65■□□□□ 0.74
CRTC3-209ENST00000560320 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
CRTC3-209ENST00000560320 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
CRTC3-209ENST00000560320 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
CRTC3-209ENST00000560320 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
CRTC3-209ENST00000560320 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
CRTC3-209ENST00000560320 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
CRTC3-209ENST00000560320 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
CRTC3-209ENST00000560320 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
CRTC3-209ENST00000560320 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
CRTC3-209ENST00000560320 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
CRTC3-209ENST00000560320 CUX2O14529 1486 aa18.65■□□□□ 0.58
CRTC3-209ENST00000560320 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
CRTC3-209ENST00000560320 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
CRTC3-209ENST00000560320 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
CRTC3-209ENST00000560320 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
CRTC3-209ENST00000560320 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
CRTC3-209ENST00000560320 WIZO95785 1651 aa18.44■□□□□ 0.54
CRTC3-209ENST00000560320 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
CRTC3-209ENST00000560320 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
CRTC3-209ENST00000560320 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
CRTC3-209ENST00000560320 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
CRTC3-209ENST00000560320 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
CRTC3-209ENST00000560320 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
CRTC3-209ENST00000560320 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
CRTC3-209ENST00000560320 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
CRTC3-209ENST00000560320 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
CRTC3-209ENST00000560320 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
CRTC3-209ENST00000560320 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
CRTC3-209ENST00000560320 NESP48681 1621 aa17.84■□□□□ 0.45
CRTC3-209ENST00000560320 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
CRTC3-209ENST00000560320 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
CRTC3-209ENST00000560320 CFTRP13569 1480 aa17.63■□□□□ 0.41
CRTC3-209ENST00000560320 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CRTC3-209ENST00000560320 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
CRTC3-209ENST00000560320 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
CRTC3-209ENST00000560320 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
CRTC3-209ENST00000560320 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
CRTC3-209ENST00000560320 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
CRTC3-209ENST00000560320 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
CRTC3-209ENST00000560320 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
CRTC3-209ENST00000560320 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
CRTC3-209ENST00000560320 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
CRTC3-209ENST00000560320 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
CRTC3-209ENST00000560320 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
CRTC3-209ENST00000560320 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
CRTC3-209ENST00000560320 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
CRTC3-209ENST00000560320 WDR62O43379 1518 aa17.42■□□□□ 0.38
CRTC3-209ENST00000560320 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
CRTC3-209ENST00000560320 CUX1P39880 1505 aa17.37■□□□□ 0.37
CRTC3-209ENST00000560320 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
CRTC3-209ENST00000560320 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
CRTC3-209ENST00000560320 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
CRTC3-209ENST00000560320 EEA1Q15075 1411 aa17.34■□□□□ 0.37
CRTC3-209ENST00000560320 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
CRTC3-209ENST00000560320 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
CRTC3-209ENST00000560320 SOGA1O94964 1423 aa17.24■□□□□ 0.35
CRTC3-209ENST00000560320 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
CRTC3-209ENST00000560320 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
CRTC3-209ENST00000560320 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
CRTC3-209ENST00000560320 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
CRTC3-209ENST00000560320 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
CRTC3-209ENST00000560320 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
CRTC3-209ENST00000560320 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
CRTC3-209ENST00000560320 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
CRTC3-209ENST00000560320 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
CRTC3-209ENST00000560320 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
CRTC3-209ENST00000560320 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
CRTC3-209ENST00000560320 KIF21BO75037 1637 aa17.1■□□□□ 0.33
CRTC3-209ENST00000560320 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
CRTC3-209ENST00000560320 GOLGA3Q08378 1498 aa17.07■□□□□ 0.32
CRTC3-209ENST00000560320 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
CRTC3-209ENST00000560320 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
CRTC3-209ENST00000560320 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
CRTC3-209ENST00000560320 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
CRTC3-209ENST00000560320 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
CRTC3-209ENST00000560320 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
CRTC3-209ENST00000560320 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
CRTC3-209ENST00000560320 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
CRTC3-209ENST00000560320 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
CRTC3-209ENST00000560320 CUL7Q14999 1698 aa16.94■□□□□ 0.3
CRTC3-209ENST00000560320 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
CRTC3-209ENST00000560320 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
CRTC3-209ENST00000560320 IGF1RP08069 1367 aa16.92■□□□□ 0.3
CRTC3-209ENST00000560320 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
CRTC3-209ENST00000560320 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
CRTC3-209ENST00000560320 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
CRTC3-209ENST00000560320 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-209ENST00000560320 CHD1O14646 1710 aa16.88■□□□□ 0.29
CRTC3-209ENST00000560320 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
CRTC3-209ENST00000560320 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms