RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
TUBBP8-201ENST00000560273 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
TUBBP8-201ENST00000560273 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
TUBBP8-201ENST00000560273 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
TUBBP8-201ENST00000560273 ABCC9O60706 1549 aa19.26■□□□□ 0.67
TUBBP8-201ENST00000560273 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
TUBBP8-201ENST00000560273 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
TUBBP8-201ENST00000560273 NACADO15069 1562 aa18.58■□□□□ 0.56
TUBBP8-201ENST00000560273 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
TUBBP8-201ENST00000560273 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
TUBBP8-201ENST00000560273 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
TUBBP8-201ENST00000560273 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
TUBBP8-201ENST00000560273 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
TUBBP8-201ENST00000560273 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
TUBBP8-201ENST00000560273 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
TUBBP8-201ENST00000560273 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
TUBBP8-201ENST00000560273 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
TUBBP8-201ENST00000560273 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TUBBP8-201ENST00000560273 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
TUBBP8-201ENST00000560273 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
TUBBP8-201ENST00000560273 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
TUBBP8-201ENST00000560273 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
TUBBP8-201ENST00000560273 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
TUBBP8-201ENST00000560273 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
TUBBP8-201ENST00000560273 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
TUBBP8-201ENST00000560273 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
TUBBP8-201ENST00000560273 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
TUBBP8-201ENST00000560273 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
TUBBP8-201ENST00000560273 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
TUBBP8-201ENST00000560273 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
TUBBP8-201ENST00000560273 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
TUBBP8-201ENST00000560273 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
TUBBP8-201ENST00000560273 WIZO95785 1651 aa17.01■□□□□ 0.31
TUBBP8-201ENST00000560273 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
TUBBP8-201ENST00000560273 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
TUBBP8-201ENST00000560273 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
TUBBP8-201ENST00000560273 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
TUBBP8-201ENST00000560273 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
TUBBP8-201ENST00000560273 NESP48681 1621 aa16.7■□□□□ 0.26
TUBBP8-201ENST00000560273 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
TUBBP8-201ENST00000560273 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
TUBBP8-201ENST00000560273 CFTRP13569 1480 aa16.62■□□□□ 0.25
TUBBP8-201ENST00000560273 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
TUBBP8-201ENST00000560273 CUX2O14529 1486 aa16.52■□□□□ 0.23
TUBBP8-201ENST00000560273 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
TUBBP8-201ENST00000560273 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
TUBBP8-201ENST00000560273 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
TUBBP8-201ENST00000560273 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
TUBBP8-201ENST00000560273 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
TUBBP8-201ENST00000560273 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
TUBBP8-201ENST00000560273 WDR62O43379 1518 aa16.29■□□□□ 0.2
TUBBP8-201ENST00000560273 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
TUBBP8-201ENST00000560273 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
TUBBP8-201ENST00000560273 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
TUBBP8-201ENST00000560273 FOXD1Q16676 465 aa16.21■□□□□ 0.19
TUBBP8-201ENST00000560273 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
TUBBP8-201ENST00000560273 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
TUBBP8-201ENST00000560273 CUX1P39880 1505 aa16.15■□□□□ 0.18
TUBBP8-201ENST00000560273 SOGA1O94964 1423 aa16.11■□□□□ 0.17
TUBBP8-201ENST00000560273 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
TUBBP8-201ENST00000560273 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
TUBBP8-201ENST00000560273 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
TUBBP8-201ENST00000560273 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
TUBBP8-201ENST00000560273 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
TUBBP8-201ENST00000560273 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
TUBBP8-201ENST00000560273 SYNJ1O43426 1573 aa16.03■□□□□ 0.16
TUBBP8-201ENST00000560273 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
TUBBP8-201ENST00000560273 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
TUBBP8-201ENST00000560273 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
TUBBP8-201ENST00000560273 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
TUBBP8-201ENST00000560273 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
TUBBP8-201ENST00000560273 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
TUBBP8-201ENST00000560273 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
TUBBP8-201ENST00000560273 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
TUBBP8-201ENST00000560273 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
TUBBP8-201ENST00000560273 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
TUBBP8-201ENST00000560273 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
TUBBP8-201ENST00000560273 FBLN2P98095 1184 aa15.85■□□□□ 0.13
TUBBP8-201ENST00000560273 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
TUBBP8-201ENST00000560273 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
TUBBP8-201ENST00000560273 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
TUBBP8-201ENST00000560273 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
TUBBP8-201ENST00000560273 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
TUBBP8-201ENST00000560273 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
TUBBP8-201ENST00000560273 IGF1RP08069 1367 aa15.76■□□□□ 0.11
TUBBP8-201ENST00000560273 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
TUBBP8-201ENST00000560273 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
TUBBP8-201ENST00000560273 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
TUBBP8-201ENST00000560273 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
TUBBP8-201ENST00000560273 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
TUBBP8-201ENST00000560273 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
TUBBP8-201ENST00000560273 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
TUBBP8-201ENST00000560273 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
TUBBP8-201ENST00000560273 ADAMTS12P58397 1594 aa15.65■□□□□ 0.1
TUBBP8-201ENST00000560273 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
TUBBP8-201ENST00000560273 EEA1Q15075 1411 aa15.63■□□□□ 0.09
TUBBP8-201ENST00000560273 CHD1O14646 1710 aa15.6■□□□□ 0.09
TUBBP8-201ENST00000560273 CUL7Q14999 1698 aa15.58■□□□□ 0.08
TUBBP8-201ENST00000560273 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
TUBBP8-201ENST00000560273 NUP160Q12769 1436 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms