RNA–Protein interactions for RNA: ENST00000560263.1

SEMA4B-216, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-216ENST00000560263 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
SEMA4B-216ENST00000560263 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
SEMA4B-216ENST00000560263 ABCC9O60706 1549 aa32.59■■■□□ 2.81
SEMA4B-216ENST00000560263 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
SEMA4B-216ENST00000560263 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
SEMA4B-216ENST00000560263 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
SEMA4B-216ENST00000560263 NACADO15069 1562 aa31.32■■■□□ 2.6
SEMA4B-216ENST00000560263 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
SEMA4B-216ENST00000560263 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
SEMA4B-216ENST00000560263 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
SEMA4B-216ENST00000560263 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
SEMA4B-216ENST00000560263 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
SEMA4B-216ENST00000560263 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
SEMA4B-216ENST00000560263 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
SEMA4B-216ENST00000560263 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
SEMA4B-216ENST00000560263 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
SEMA4B-216ENST00000560263 CC2D2AQ9P2K1 1620 aa29.47■■■□□ 2.31
SEMA4B-216ENST00000560263 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
SEMA4B-216ENST00000560263 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
SEMA4B-216ENST00000560263 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
SEMA4B-216ENST00000560263 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
SEMA4B-216ENST00000560263 ATAD2BQ9ULI0 1458 aa28.96■■■□□ 2.23
SEMA4B-216ENST00000560263 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
SEMA4B-216ENST00000560263 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
SEMA4B-216ENST00000560263 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
SEMA4B-216ENST00000560263 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
SEMA4B-216ENST00000560263 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
SEMA4B-216ENST00000560263 WIZO95785 1651 aa28.73■■■□□ 2.19
SEMA4B-216ENST00000560263 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
SEMA4B-216ENST00000560263 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
SEMA4B-216ENST00000560263 NESP48681 1621 aa28.25■■■□□ 2.11
SEMA4B-216ENST00000560263 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
SEMA4B-216ENST00000560263 LAMC3Q9Y6N6 1575 aa28.12■■■□□ 2.09
SEMA4B-216ENST00000560263 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
SEMA4B-216ENST00000560263 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
SEMA4B-216ENST00000560263 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
SEMA4B-216ENST00000560263 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
SEMA4B-216ENST00000560263 CFTRP13569 1480 aa27.93■■■□□ 2.06
SEMA4B-216ENST00000560263 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
SEMA4B-216ENST00000560263 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
SEMA4B-216ENST00000560263 THOC2Q8NI27 1593 aaKnown RBP27.76■■■□□ 2.03
SEMA4B-216ENST00000560263 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
SEMA4B-216ENST00000560263 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
SEMA4B-216ENST00000560263 CUX2O14529 1486 aa27.67■■■□□ 2.02
SEMA4B-216ENST00000560263 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
SEMA4B-216ENST00000560263 WDR62O43379 1518 aa27.56■■■□□ 2
SEMA4B-216ENST00000560263 URB2Q14146 1524 aaKnown RBP27.51■■□□□ 1.99
SEMA4B-216ENST00000560263 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
SEMA4B-216ENST00000560263 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
SEMA4B-216ENST00000560263 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
SEMA4B-216ENST00000560263 CUX1P39880 1505 aa27.2■■□□□ 1.94
SEMA4B-216ENST00000560263 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
SEMA4B-216ENST00000560263 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
SEMA4B-216ENST00000560263 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
SEMA4B-216ENST00000560263 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
SEMA4B-216ENST00000560263 RAD54L2Q9Y4B4 1467 aa27.04■■□□□ 1.92
SEMA4B-216ENST00000560263 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
SEMA4B-216ENST00000560263 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
SEMA4B-216ENST00000560263 SOGA1O94964 1423 aa27.02■■□□□ 1.92
SEMA4B-216ENST00000560263 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
SEMA4B-216ENST00000560263 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
SEMA4B-216ENST00000560263 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
SEMA4B-216ENST00000560263 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
SEMA4B-216ENST00000560263 AQRO60306 1485 aaKnown RBP eCLIP26.9■■□□□ 1.9
SEMA4B-216ENST00000560263 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
SEMA4B-216ENST00000560263 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
SEMA4B-216ENST00000560263 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
SEMA4B-216ENST00000560263 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.87
SEMA4B-216ENST00000560263 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
SEMA4B-216ENST00000560263 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
SEMA4B-216ENST00000560263 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
SEMA4B-216ENST00000560263 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
SEMA4B-216ENST00000560263 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
SEMA4B-216ENST00000560263 CHD1O14646 1710 aa26.59■■□□□ 1.85
SEMA4B-216ENST00000560263 MAGI1Q96QZ7 1491 aaPredicted RBP26.57■■□□□ 1.84
SEMA4B-216ENST00000560263 FBLN2P98095 1184 aa26.57■■□□□ 1.84
SEMA4B-216ENST00000560263 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
SEMA4B-216ENST00000560263 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
SEMA4B-216ENST00000560263 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
SEMA4B-216ENST00000560263 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
SEMA4B-216ENST00000560263 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
SEMA4B-216ENST00000560263 KIF27Q86VH2 1401 aa26.47■■□□□ 1.83
SEMA4B-216ENST00000560263 ADAMTS12P58397 1594 aa26.44■■□□□ 1.82
SEMA4B-216ENST00000560263 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
SEMA4B-216ENST00000560263 IGF1RP08069 1367 aa26.35■■□□□ 1.81
SEMA4B-216ENST00000560263 GRIN2AQ12879 1464 aa26.34■■□□□ 1.81
SEMA4B-216ENST00000560263 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
SEMA4B-216ENST00000560263 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
SEMA4B-216ENST00000560263 CUL7Q14999 1698 aa26.27■■□□□ 1.8
SEMA4B-216ENST00000560263 CLASP1Q7Z460 1538 aa26.26■■□□□ 1.79
SEMA4B-216ENST00000560263 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
SEMA4B-216ENST00000560263 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.79
SEMA4B-216ENST00000560263 NUP160Q12769 1436 aa26.2■■□□□ 1.78
SEMA4B-216ENST00000560263 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
SEMA4B-216ENST00000560263 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
SEMA4B-216ENST00000560263 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
SEMA4B-216ENST00000560263 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
SEMA4B-216ENST00000560263 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
SEMA4B-216ENST00000560263 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
SEMA4B-216ENST00000560263 EEA1Q15075 1411 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms