RNA–Protein interactions for RNA: ENST00000560039.1

NIPA2-207, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 4

Gene NIPA2, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-207ENST00000560039 NISCHQ9Y2I1 1504 aa54.8■■■■■ 6.36
NIPA2-207ENST00000560039 CCDC180Q9P1Z9 1646 aa48.57■■■■■ 5.37
NIPA2-207ENST00000560039 ABCC9O60706 1549 aa48.11■■■■■ 5.29
NIPA2-207ENST00000560039 DCAF8L2P0C7V8 631 aa46.12■■■■■ 4.97
NIPA2-207ENST00000560039 RB1CC1Q8TDY2 1594 aa45.97■■■■■ 4.95
NIPA2-207ENST00000560039 NACADO15069 1562 aa45.91■■■■■ 4.94
NIPA2-207ENST00000560039 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.88
NIPA2-207ENST00000560039 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
NIPA2-207ENST00000560039 DCAF1Q9Y4B6 1507 aa45.27■■■■■ 4.84
NIPA2-207ENST00000560039 PABPN1Q86U42 306 aaKnown RBP eCLIP45.09■■■■■ 4.81
NIPA2-207ENST00000560039 UNC13AQ9UPW8 1703 aa44.78■■■■■ 4.76
NIPA2-207ENST00000560039 BICRAQ9NZM4 1560 aa44.71■■■■■ 4.75
NIPA2-207ENST00000560039 DNAJC5BQ9UF47 199 aa44.71■■■■■ 4.75
NIPA2-207ENST00000560039 SCRIBQ14160 1630 aa44.43■■■■■ 4.7
NIPA2-207ENST00000560039 SHROOM4Q9ULL8 1493 aa44.08■■■■■ 4.65
NIPA2-207ENST00000560039 EIF4G1Q04637 1599 aaKnown RBP43.5■■■■■ 4.55
NIPA2-207ENST00000560039 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
NIPA2-207ENST00000560039 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
NIPA2-207ENST00000560039 NCAPD3P42695 1498 aa42.52■■■■■ 4.4
NIPA2-207ENST00000560039 ATAD2BQ9ULI0 1458 aa42.49■■■■■ 4.39
NIPA2-207ENST00000560039 SMARCA4P51532 1647 aa42.47■■■■■ 4.39
NIPA2-207ENST00000560039 BAZ1AQ9NRL2 1556 aaPredicted RBP42.39■■■■■ 4.38
NIPA2-207ENST00000560039 MROH2BQ7Z745 1585 aa42.27■■■■■ 4.36
NIPA2-207ENST00000560039 SMARCA2P51531 1590 aa42.26■■■■■ 4.36
NIPA2-207ENST00000560039 HMGXB3Q12766 1538 aa42.09■■■■■ 4.33
NIPA2-207ENST00000560039 PEG3Q9GZU2 1588 aa42.08■■■■■ 4.33
NIPA2-207ENST00000560039 BAZ1BQ9UIG0 1483 aaKnown RBP42.01■■■■■ 4.32
NIPA2-207ENST00000560039 RSF1Q96T23 1441 aaPredicted RBP41.76■■■■■ 4.28
NIPA2-207ENST00000560039 WIZO95785 1651 aa41.68■■■■■ 4.26
NIPA2-207ENST00000560039 NESP48681 1621 aa41.57■■■■■ 4.25
NIPA2-207ENST00000560039 ERCC6Q03468 1493 aa41.4■■■■■ 4.22
NIPA2-207ENST00000560039 CADPSQ9ULU8 1353 aa41.3■■■■■ 4.2
NIPA2-207ENST00000560039 LAMC3Q9Y6N6 1575 aa41.24■■■■■ 4.19
NIPA2-207ENST00000560039 TOP2AP11388 1531 aaKnown RBP41.21■■■■■ 4.19
NIPA2-207ENST00000560039 PDS5BQ9NTI5 1447 aa41.12■■■■■ 4.17
NIPA2-207ENST00000560039 CUX2O14529 1486 aa41.06■■■■■ 4.16
NIPA2-207ENST00000560039 CFTRP13569 1480 aa40.93■■■■■ 4.14
NIPA2-207ENST00000560039 CCDC88BA6NC98 1476 aa40.9■■■■■ 4.14
NIPA2-207ENST00000560039 KIF21AQ7Z4S6 1674 aa40.8■■■■■ 4.12
NIPA2-207ENST00000560039 THOC2Q8NI27 1593 aaKnown RBP40.8■■■■■ 4.12
NIPA2-207ENST00000560039 FANCD2Q9BXW9 1451 aa40.72■■■■■ 4.11
NIPA2-207ENST00000560039 MRC2Q9UBG0 1479 aa40.66■■■■■ 4.1
NIPA2-207ENST00000560039 CEP164Q9UPV0 1460 aa40.63■■■■■ 4.09
NIPA2-207ENST00000560039 SUPT5HO00267 1087 aaKnown RBP40.56■■■■■ 4.08
NIPA2-207ENST00000560039 WDR62O43379 1518 aa40.5■■■■■ 4.07
NIPA2-207ENST00000560039 DNAJC5Q9H3Z4 198 aa40.4■■■■■ 4.06
NIPA2-207ENST00000560039 URB2Q14146 1524 aaKnown RBP40.36■■■■■ 4.05
NIPA2-207ENST00000560039 PRDM2Q13029 1718 aa40.16■■■■■ 4.02
NIPA2-207ENST00000560039 TOPBP1Q92547 1522 aa40.03■■■■■ 4
NIPA2-207ENST00000560039 ABCC8Q09428 1581 aa39.97■■■■□ 3.99
NIPA2-207ENST00000560039 DNMBPQ6XZF7 1577 aa39.86■■■■□ 3.97
NIPA2-207ENST00000560039 IFT140Q96RY7 1462 aa39.84■■■■□ 3.97
NIPA2-207ENST00000560039 ZNF608Q9ULD9 1512 aaPredicted RBP39.76■■■■□ 3.96
NIPA2-207ENST00000560039 POLA1P09884 1462 aaPredicted RBP39.68■■■■□ 3.94
NIPA2-207ENST00000560039 CUX1P39880 1505 aa39.64■■■■□ 3.94
NIPA2-207ENST00000560039 SOGA1O94964 1423 aa39.6■■■■□ 3.93
NIPA2-207ENST00000560039 RAD54L2Q9Y4B4 1467 aa39.6■■■■□ 3.93
NIPA2-207ENST00000560039 AQRO60306 1485 aaKnown RBP eCLIP39.56■■■■□ 3.92
NIPA2-207ENST00000560039 TARBP1Q13395 1621 aaKnown RBP39.54■■■■□ 3.92
NIPA2-207ENST00000560039 FGD5Q6ZNL6 1462 aa39.53■■■■□ 3.92
NIPA2-207ENST00000560039 OSCARQ8IYS5 282 aa39.52■■■■□ 3.92
NIPA2-207ENST00000560039 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
NIPA2-207ENST00000560039 EIF4G3O43432 1585 aaKnown RBP39.37■■■■□ 3.89
NIPA2-207ENST00000560039 WRNQ14191 1432 aaPredicted RBP eCLIP39.3■■■■□ 3.88
NIPA2-207ENST00000560039 FBLN2P98095 1184 aa39.15■■■■□ 3.86
NIPA2-207ENST00000560039 ABCA10Q8WWZ4 1543 aa39.14■■■■□ 3.86
NIPA2-207ENST00000560039 SYNJ1O43426 1573 aa39.13■■■■□ 3.85
NIPA2-207ENST00000560039 TOP2BQ02880 1626 aa39.11■■■■□ 3.85
NIPA2-207ENST00000560039 WDR97A6NE52 1622 aa39.09■■■■□ 3.85
NIPA2-207ENST00000560039 GRIN2BQ13224 1484 aa39.08■■■■□ 3.85
NIPA2-207ENST00000560039 GAPVD1Q14C86 1478 aa39.06■■■■□ 3.84
NIPA2-207ENST00000560039 SNAPC4Q5SXM2 1469 aa39.05■■■■□ 3.84
NIPA2-207ENST00000560039 BIVM-ERCC5R4GMW8 1640 aa39.04■■■■□ 3.84
NIPA2-207ENST00000560039 CHMP7Q8WUX9 453 aaPredicted RBP39■■■■□ 3.83
NIPA2-207ENST00000560039 MAGI1Q96QZ7 1491 aaPredicted RBP38.95■■■■□ 3.83
NIPA2-207ENST00000560039 TRIM41Q8WV44 630 aa38.89■■■■□ 3.82
NIPA2-207ENST00000560039 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
NIPA2-207ENST00000560039 CHD1O14646 1710 aa38.86■■■■□ 3.81
NIPA2-207ENST00000560039 SYNJ2O15056 1496 aa38.84■■■■□ 3.81
NIPA2-207ENST00000560039 PBRM1Q86U86 1689 aa38.72■■■■□ 3.79
NIPA2-207ENST00000560039 ARHGEF11O15085 1522 aa38.69■■■■□ 3.78
NIPA2-207ENST00000560039 RIMBP3CA6NJZ7 1639 aa38.67■■■■□ 3.78
NIPA2-207ENST00000560039 RIMBP3BA6NNM3 1639 aa38.67■■■■□ 3.78
NIPA2-207ENST00000560039 RIMBP3Q9UFD9 1639 aa38.67■■■■□ 3.78
NIPA2-207ENST00000560039 FHAD1B1AJZ9 1412 aa38.62■■■■□ 3.77
NIPA2-207ENST00000560039 ERICH3Q5RHP9 1530 aa38.6■■■■□ 3.77
NIPA2-207ENST00000560039 CLASP1Q7Z460 1538 aa38.6■■■■□ 3.77
NIPA2-207ENST00000560039 CYB5RLQ6IPT4 315 aa38.57■■■■□ 3.76
NIPA2-207ENST00000560039 GRIN2AQ12879 1464 aa38.55■■■■□ 3.76
NIPA2-207ENST00000560039 IGF1RP08069 1367 aa38.54■■■■□ 3.76
NIPA2-207ENST00000560039 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
NIPA2-207ENST00000560039 KIF27Q86VH2 1401 aa38.49■■■■□ 3.75
NIPA2-207ENST00000560039 NUP160Q12769 1436 aa38.46■■■■□ 3.75
NIPA2-207ENST00000560039 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
NIPA2-207ENST00000560039 CEP170Q5SW79 1584 aa38.34■■■■□ 3.73
NIPA2-207ENST00000560039 CARMIL1Q5VZK9 1371 aa38.23■■■■□ 3.71
NIPA2-207ENST00000560039 JPH4Q96JJ6 628 aa38.22■■■■□ 3.71
NIPA2-207ENST00000560039 RUSC2Q8N2Y8 1516 aa38.17■■■■□ 3.7
NIPA2-207ENST00000560039 ERCC6L2Q5T890 1561 aa38.13■■■■□ 3.69
NIPA2-207ENST00000560039 CUL7Q14999 1698 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms