RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
TM2D3-208ENST00000559891 CCDC180Q9P1Z9 1646 aa23.79■■□□□ 1.4
TM2D3-208ENST00000559891 ABCC9O60706 1549 aa23.07■■□□□ 1.28
TM2D3-208ENST00000559891 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
TM2D3-208ENST00000559891 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
TM2D3-208ENST00000559891 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
TM2D3-208ENST00000559891 NACADO15069 1562 aa22.27■■□□□ 1.16
TM2D3-208ENST00000559891 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
TM2D3-208ENST00000559891 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
TM2D3-208ENST00000559891 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
TM2D3-208ENST00000559891 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
TM2D3-208ENST00000559891 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
TM2D3-208ENST00000559891 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
TM2D3-208ENST00000559891 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.06
TM2D3-208ENST00000559891 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
TM2D3-208ENST00000559891 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
TM2D3-208ENST00000559891 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
TM2D3-208ENST00000559891 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
TM2D3-208ENST00000559891 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
TM2D3-208ENST00000559891 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
TM2D3-208ENST00000559891 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
TM2D3-208ENST00000559891 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
TM2D3-208ENST00000559891 WIZO95785 1651 aa20.83■□□□□ 0.92
TM2D3-208ENST00000559891 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
TM2D3-208ENST00000559891 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
TM2D3-208ENST00000559891 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
TM2D3-208ENST00000559891 SMARCA2P51531 1590 aa20.64■□□□□ 0.89
TM2D3-208ENST00000559891 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
TM2D3-208ENST00000559891 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
TM2D3-208ENST00000559891 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TM2D3-208ENST00000559891 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
TM2D3-208ENST00000559891 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
TM2D3-208ENST00000559891 NESP48681 1621 aa20.14■□□□□ 0.82
TM2D3-208ENST00000559891 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
TM2D3-208ENST00000559891 CFTRP13569 1480 aa20.04■□□□□ 0.8
TM2D3-208ENST00000559891 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
TM2D3-208ENST00000559891 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
TM2D3-208ENST00000559891 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
TM2D3-208ENST00000559891 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
TM2D3-208ENST00000559891 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.77
TM2D3-208ENST00000559891 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
TM2D3-208ENST00000559891 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
TM2D3-208ENST00000559891 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
TM2D3-208ENST00000559891 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
TM2D3-208ENST00000559891 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
TM2D3-208ENST00000559891 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
TM2D3-208ENST00000559891 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
TM2D3-208ENST00000559891 CUX1P39880 1505 aa19.66■□□□□ 0.74
TM2D3-208ENST00000559891 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
TM2D3-208ENST00000559891 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
TM2D3-208ENST00000559891 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
TM2D3-208ENST00000559891 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
TM2D3-208ENST00000559891 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
TM2D3-208ENST00000559891 DNMBPQ6XZF7 1577 aa19.55■□□□□ 0.72
TM2D3-208ENST00000559891 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
TM2D3-208ENST00000559891 BIVM-ERCC5R4GMW8 1640 aa19.53■□□□□ 0.72
TM2D3-208ENST00000559891 WDR62O43379 1518 aa19.52■□□□□ 0.72
TM2D3-208ENST00000559891 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
TM2D3-208ENST00000559891 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
TM2D3-208ENST00000559891 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
TM2D3-208ENST00000559891 CUX2O14529 1486 aa19.43■□□□□ 0.7
TM2D3-208ENST00000559891 SOGA1O94964 1423 aa19.4■□□□□ 0.7
TM2D3-208ENST00000559891 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
TM2D3-208ENST00000559891 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
TM2D3-208ENST00000559891 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
TM2D3-208ENST00000559891 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
TM2D3-208ENST00000559891 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
TM2D3-208ENST00000559891 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
TM2D3-208ENST00000559891 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
TM2D3-208ENST00000559891 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
TM2D3-208ENST00000559891 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
TM2D3-208ENST00000559891 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
TM2D3-208ENST00000559891 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
TM2D3-208ENST00000559891 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
TM2D3-208ENST00000559891 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
TM2D3-208ENST00000559891 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
TM2D3-208ENST00000559891 IGF1RP08069 1367 aa19.13■□□□□ 0.65
TM2D3-208ENST00000559891 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
TM2D3-208ENST00000559891 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
TM2D3-208ENST00000559891 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
TM2D3-208ENST00000559891 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
TM2D3-208ENST00000559891 EEA1Q15075 1411 aa19.05■□□□□ 0.64
TM2D3-208ENST00000559891 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
TM2D3-208ENST00000559891 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.63
TM2D3-208ENST00000559891 CARMIL1Q5VZK9 1371 aa19■□□□□ 0.63
TM2D3-208ENST00000559891 PRXQ9BXM0 1461 aa18.98■□□□□ 0.63
TM2D3-208ENST00000559891 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
TM2D3-208ENST00000559891 FBLN2P98095 1184 aa18.97■□□□□ 0.63
TM2D3-208ENST00000559891 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
TM2D3-208ENST00000559891 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
TM2D3-208ENST00000559891 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
TM2D3-208ENST00000559891 CUL7Q14999 1698 aa18.92■□□□□ 0.62
TM2D3-208ENST00000559891 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
TM2D3-208ENST00000559891 KIF21BO75037 1637 aa18.89■□□□□ 0.61
TM2D3-208ENST00000559891 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
TM2D3-208ENST00000559891 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
TM2D3-208ENST00000559891 CHD1O14646 1710 aa18.85■□□□□ 0.61
TM2D3-208ENST00000559891 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
TM2D3-208ENST00000559891 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
TM2D3-208ENST00000559891 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms