RNA–Protein interactions for RNA: ENST00000559872.1

PIF1-207, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-207ENST00000559872 NISCHQ9Y2I1 1504 aa38.86■■■■□ 3.81
PIF1-207ENST00000559872 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
PIF1-207ENST00000559872 ABCC9O60706 1549 aa33.69■■■□□ 2.98
PIF1-207ENST00000559872 NACADO15069 1562 aa32.45■■■□□ 2.79
PIF1-207ENST00000559872 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
PIF1-207ENST00000559872 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
PIF1-207ENST00000559872 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
PIF1-207ENST00000559872 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
PIF1-207ENST00000559872 DCAF1Q9Y4B6 1507 aa32.2■■■□□ 2.74
PIF1-207ENST00000559872 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
PIF1-207ENST00000559872 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
PIF1-207ENST00000559872 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.63
PIF1-207ENST00000559872 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
PIF1-207ENST00000559872 SHROOM4Q9ULL8 1493 aa31.2■■■□□ 2.58
PIF1-207ENST00000559872 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
PIF1-207ENST00000559872 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
PIF1-207ENST00000559872 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
PIF1-207ENST00000559872 CECR2Q9BXF3 1484 aa30.29■■■□□ 2.44
PIF1-207ENST00000559872 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
PIF1-207ENST00000559872 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
PIF1-207ENST00000559872 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
PIF1-207ENST00000559872 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
PIF1-207ENST00000559872 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
PIF1-207ENST00000559872 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
PIF1-207ENST00000559872 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
PIF1-207ENST00000559872 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
PIF1-207ENST00000559872 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
PIF1-207ENST00000559872 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
PIF1-207ENST00000559872 WIZO95785 1651 aa29.54■■■□□ 2.32
PIF1-207ENST00000559872 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
PIF1-207ENST00000559872 NESP48681 1621 aa29.16■■■□□ 2.26
PIF1-207ENST00000559872 LAMC3Q9Y6N6 1575 aa29.12■■■□□ 2.25
PIF1-207ENST00000559872 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
PIF1-207ENST00000559872 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
PIF1-207ENST00000559872 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
PIF1-207ENST00000559872 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
PIF1-207ENST00000559872 CFTRP13569 1480 aa28.94■■■□□ 2.22
PIF1-207ENST00000559872 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
PIF1-207ENST00000559872 CUX2O14529 1486 aa28.75■■■□□ 2.19
PIF1-207ENST00000559872 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
PIF1-207ENST00000559872 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
PIF1-207ENST00000559872 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
PIF1-207ENST00000559872 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
PIF1-207ENST00000559872 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
PIF1-207ENST00000559872 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
PIF1-207ENST00000559872 WDR62O43379 1518 aa28.53■■■□□ 2.16
PIF1-207ENST00000559872 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
PIF1-207ENST00000559872 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
PIF1-207ENST00000559872 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
PIF1-207ENST00000559872 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
PIF1-207ENST00000559872 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
PIF1-207ENST00000559872 CUX1P39880 1505 aa28.07■■■□□ 2.08
PIF1-207ENST00000559872 POLA1P09884 1462 aaPredicted RBP28.03■■■□□ 2.08
PIF1-207ENST00000559872 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
PIF1-207ENST00000559872 SOGA1O94964 1423 aa27.95■■■□□ 2.07
PIF1-207ENST00000559872 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
PIF1-207ENST00000559872 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
PIF1-207ENST00000559872 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
PIF1-207ENST00000559872 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
PIF1-207ENST00000559872 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
PIF1-207ENST00000559872 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
PIF1-207ENST00000559872 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.041e-6■■■■□ 20.4
PIF1-207ENST00000559872 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
PIF1-207ENST00000559872 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
PIF1-207ENST00000559872 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
PIF1-207ENST00000559872 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
PIF1-207ENST00000559872 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
PIF1-207ENST00000559872 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
PIF1-207ENST00000559872 OSCARQ8IYS5 282 aa27.61■■■□□ 2.01
PIF1-207ENST00000559872 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
PIF1-207ENST00000559872 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
PIF1-207ENST00000559872 ABCA5Q8WWZ7 1642 aa27.56■■■□□ 2
PIF1-207ENST00000559872 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
PIF1-207ENST00000559872 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
PIF1-207ENST00000559872 FBLN2P98095 1184 aa27.44■■□□□ 1.98
PIF1-207ENST00000559872 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
PIF1-207ENST00000559872 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
PIF1-207ENST00000559872 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
PIF1-207ENST00000559872 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
PIF1-207ENST00000559872 CHD1O14646 1710 aa27.36■■□□□ 1.97
PIF1-207ENST00000559872 KIF27Q86VH2 1401 aa27.36■■□□□ 1.97
PIF1-207ENST00000559872 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
PIF1-207ENST00000559872 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
PIF1-207ENST00000559872 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
PIF1-207ENST00000559872 IGF1RP08069 1367 aa27.27■■□□□ 1.96
PIF1-207ENST00000559872 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
PIF1-207ENST00000559872 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
PIF1-207ENST00000559872 NUP160Q12769 1436 aa27.15■■□□□ 1.94
PIF1-207ENST00000559872 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
PIF1-207ENST00000559872 CUL7Q14999 1698 aa27.09■■□□□ 1.93
PIF1-207ENST00000559872 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
PIF1-207ENST00000559872 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
PIF1-207ENST00000559872 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
PIF1-207ENST00000559872 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
PIF1-207ENST00000559872 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
PIF1-207ENST00000559872 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
PIF1-207ENST00000559872 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
PIF1-207ENST00000559872 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
PIF1-207ENST00000559872 KIAA0586Q9BVV6 1533 aa26.9■■□□□ 1.9
PIF1-207ENST00000559872 JPH4Q96JJ6 628 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms