RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
CHRNB4-204ENST00000559849 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
CHRNB4-204ENST00000559849 ABCC9O60706 1549 aa28.7■■■□□ 2.18
CHRNB4-204ENST00000559849 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
CHRNB4-204ENST00000559849 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
CHRNB4-204ENST00000559849 NACADO15069 1562 aa27.61■■■□□ 2.01
CHRNB4-204ENST00000559849 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
CHRNB4-204ENST00000559849 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
CHRNB4-204ENST00000559849 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
CHRNB4-204ENST00000559849 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
CHRNB4-204ENST00000559849 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
CHRNB4-204ENST00000559849 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
CHRNB4-204ENST00000559849 BICRAQ9NZM4 1560 aa26.77■■□□□ 1.88
CHRNB4-204ENST00000559849 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
CHRNB4-204ENST00000559849 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
CHRNB4-204ENST00000559849 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
CHRNB4-204ENST00000559849 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
CHRNB4-204ENST00000559849 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
CHRNB4-204ENST00000559849 SMARCA4P51532 1647 aa25.62■■□□□ 1.69
CHRNB4-204ENST00000559849 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
CHRNB4-204ENST00000559849 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
CHRNB4-204ENST00000559849 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
CHRNB4-204ENST00000559849 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
CHRNB4-204ENST00000559849 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
CHRNB4-204ENST00000559849 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
CHRNB4-204ENST00000559849 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
CHRNB4-204ENST00000559849 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
CHRNB4-204ENST00000559849 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
CHRNB4-204ENST00000559849 WIZO95785 1651 aa25.18■■□□□ 1.62
CHRNB4-204ENST00000559849 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
CHRNB4-204ENST00000559849 NESP48681 1621 aa24.84■■□□□ 1.57
CHRNB4-204ENST00000559849 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
CHRNB4-204ENST00000559849 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
CHRNB4-204ENST00000559849 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
CHRNB4-204ENST00000559849 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
CHRNB4-204ENST00000559849 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
CHRNB4-204ENST00000559849 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
CHRNB4-204ENST00000559849 CFTRP13569 1480 aa24.6■■□□□ 1.53
CHRNB4-204ENST00000559849 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
CHRNB4-204ENST00000559849 CUX2O14529 1486 aa24.47■■□□□ 1.51
CHRNB4-204ENST00000559849 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
CHRNB4-204ENST00000559849 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
CHRNB4-204ENST00000559849 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
CHRNB4-204ENST00000559849 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
CHRNB4-204ENST00000559849 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
CHRNB4-204ENST00000559849 WDR62O43379 1518 aa24.27■■□□□ 1.48
CHRNB4-204ENST00000559849 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
CHRNB4-204ENST00000559849 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
CHRNB4-204ENST00000559849 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
CHRNB4-204ENST00000559849 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
CHRNB4-204ENST00000559849 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
CHRNB4-204ENST00000559849 CUX1P39880 1505 aa23.87■■□□□ 1.41
CHRNB4-204ENST00000559849 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
CHRNB4-204ENST00000559849 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
CHRNB4-204ENST00000559849 SOGA1O94964 1423 aa23.79■■□□□ 1.4
CHRNB4-204ENST00000559849 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
CHRNB4-204ENST00000559849 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CHRNB4-204ENST00000559849 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
CHRNB4-204ENST00000559849 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
CHRNB4-204ENST00000559849 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
CHRNB4-204ENST00000559849 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
CHRNB4-204ENST00000559849 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
CHRNB4-204ENST00000559849 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
CHRNB4-204ENST00000559849 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
CHRNB4-204ENST00000559849 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
CHRNB4-204ENST00000559849 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
CHRNB4-204ENST00000559849 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
CHRNB4-204ENST00000559849 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
CHRNB4-204ENST00000559849 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
CHRNB4-204ENST00000559849 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
CHRNB4-204ENST00000559849 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
CHRNB4-204ENST00000559849 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.35
CHRNB4-204ENST00000559849 FBLN2P98095 1184 aa23.43■■□□□ 1.34
CHRNB4-204ENST00000559849 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
CHRNB4-204ENST00000559849 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
CHRNB4-204ENST00000559849 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
CHRNB4-204ENST00000559849 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
CHRNB4-204ENST00000559849 CHD1O14646 1710 aa23.37■■□□□ 1.33
CHRNB4-204ENST00000559849 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
CHRNB4-204ENST00000559849 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
CHRNB4-204ENST00000559849 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
CHRNB4-204ENST00000559849 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
CHRNB4-204ENST00000559849 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
CHRNB4-204ENST00000559849 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
CHRNB4-204ENST00000559849 IGF1RP08069 1367 aa23.18■■□□□ 1.3
CHRNB4-204ENST00000559849 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
CHRNB4-204ENST00000559849 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
CHRNB4-204ENST00000559849 CUL7Q14999 1698 aa23.08■■□□□ 1.29
CHRNB4-204ENST00000559849 ARHGEF11O15085 1522 aa23.08■■□□□ 1.28
CHRNB4-204ENST00000559849 NUP160Q12769 1436 aa23.07■■□□□ 1.28
CHRNB4-204ENST00000559849 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
CHRNB4-204ENST00000559849 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
CHRNB4-204ENST00000559849 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
CHRNB4-204ENST00000559849 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
CHRNB4-204ENST00000559849 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
CHRNB4-204ENST00000559849 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
CHRNB4-204ENST00000559849 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
CHRNB4-204ENST00000559849 CYB5RLQ6IPT4 315 aa22.93■■□□□ 1.26
CHRNB4-204ENST00000559849 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
CHRNB4-204ENST00000559849 JPH4Q96JJ6 628 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms