RNA–Protein interactions for RNA: ENST00000559828.1

PRC1-216, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-216ENST00000559828 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
PRC1-216ENST00000559828 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
PRC1-216ENST00000559828 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
PRC1-216ENST00000559828 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
PRC1-216ENST00000559828 ABCC9O60706 1549 aa19.59■□□□□ 0.73
PRC1-216ENST00000559828 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
PRC1-216ENST00000559828 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
PRC1-216ENST00000559828 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
PRC1-216ENST00000559828 NACADO15069 1562 aa19.23■□□□□ 0.67
PRC1-216ENST00000559828 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
PRC1-216ENST00000559828 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
PRC1-216ENST00000559828 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
PRC1-216ENST00000559828 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
PRC1-216ENST00000559828 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
PRC1-216ENST00000559828 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
PRC1-216ENST00000559828 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRC1-216ENST00000559828 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
PRC1-216ENST00000559828 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
PRC1-216ENST00000559828 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
PRC1-216ENST00000559828 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
PRC1-216ENST00000559828 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
PRC1-216ENST00000559828 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
PRC1-216ENST00000559828 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
PRC1-216ENST00000559828 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
PRC1-216ENST00000559828 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
PRC1-216ENST00000559828 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
PRC1-216ENST00000559828 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
PRC1-216ENST00000559828 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
PRC1-216ENST00000559828 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
PRC1-216ENST00000559828 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
PRC1-216ENST00000559828 WIZO95785 1651 aa17.58■□□□□ 0.41
PRC1-216ENST00000559828 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
PRC1-216ENST00000559828 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
PRC1-216ENST00000559828 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
PRC1-216ENST00000559828 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
PRC1-216ENST00000559828 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
PRC1-216ENST00000559828 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
PRC1-216ENST00000559828 CFTRP13569 1480 aa17.18■□□□□ 0.34
PRC1-216ENST00000559828 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
PRC1-216ENST00000559828 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
PRC1-216ENST00000559828 NESP48681 1621 aa17.03■□□□□ 0.32
PRC1-216ENST00000559828 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
PRC1-216ENST00000559828 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
PRC1-216ENST00000559828 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
PRC1-216ENST00000559828 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
PRC1-216ENST00000559828 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
PRC1-216ENST00000559828 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
PRC1-216ENST00000559828 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
PRC1-216ENST00000559828 WDR62O43379 1518 aa16.77■□□□□ 0.28
PRC1-216ENST00000559828 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
PRC1-216ENST00000559828 CUX2O14529 1486 aa16.73■□□□□ 0.27
PRC1-216ENST00000559828 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
PRC1-216ENST00000559828 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
PRC1-216ENST00000559828 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
PRC1-216ENST00000559828 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
PRC1-216ENST00000559828 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
PRC1-216ENST00000559828 CUX1P39880 1505 aa16.67■□□□□ 0.26
PRC1-216ENST00000559828 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
PRC1-216ENST00000559828 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
PRC1-216ENST00000559828 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
PRC1-216ENST00000559828 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
PRC1-216ENST00000559828 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
PRC1-216ENST00000559828 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
PRC1-216ENST00000559828 SOGA1O94964 1423 aa16.56■□□□□ 0.24
PRC1-216ENST00000559828 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
PRC1-216ENST00000559828 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
PRC1-216ENST00000559828 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
PRC1-216ENST00000559828 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
PRC1-216ENST00000559828 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
PRC1-216ENST00000559828 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
PRC1-216ENST00000559828 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
PRC1-216ENST00000559828 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
PRC1-216ENST00000559828 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
PRC1-216ENST00000559828 EEA1Q15075 1411 aa16.36■□□□□ 0.21
PRC1-216ENST00000559828 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PRC1-216ENST00000559828 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
PRC1-216ENST00000559828 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.211e-7■■■■□ 24.8
PRC1-216ENST00000559828 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
PRC1-216ENST00000559828 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
PRC1-216ENST00000559828 IGF1RP08069 1367 aa16.29■□□□□ 0.2
PRC1-216ENST00000559828 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
PRC1-216ENST00000559828 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
PRC1-216ENST00000559828 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
PRC1-216ENST00000559828 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
PRC1-216ENST00000559828 CUL7Q14999 1698 aa16.21■□□□□ 0.19
PRC1-216ENST00000559828 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
PRC1-216ENST00000559828 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
PRC1-216ENST00000559828 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
PRC1-216ENST00000559828 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
PRC1-216ENST00000559828 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
PRC1-216ENST00000559828 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
PRC1-216ENST00000559828 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
PRC1-216ENST00000559828 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
PRC1-216ENST00000559828 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
PRC1-216ENST00000559828 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
PRC1-216ENST00000559828 KIF21BO75037 1637 aa16.07■□□□□ 0.16
PRC1-216ENST00000559828 FBLN2P98095 1184 aa16.06■□□□□ 0.16
PRC1-216ENST00000559828 NUP160Q12769 1436 aa16.05■□□□□ 0.16
PRC1-216ENST00000559828 CHD1O14646 1710 aa16.05■□□□□ 0.16
PRC1-216ENST00000559828 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms