RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 NISCHQ9Y2I1 1504 aa47.39■■■■■ 5.18
LINS1-206ENST00000559827 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
LINS1-206ENST00000559827 ABCC9O60706 1549 aa40.67■■■■■ 4.1
LINS1-206ENST00000559827 ZCCHC6Q5VYS8 1495 aaKnown RBP39.59■■■■□ 3.93
LINS1-206ENST00000559827 NACADO15069 1562 aa39.43■■■■□ 3.9
LINS1-206ENST00000559827 MYO15BQ96JP2 1530 aa39.38■■■■□ 3.89
LINS1-206ENST00000559827 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.89
LINS1-206ENST00000559827 DCAF1Q9Y4B6 1507 aa39.32■■■■□ 3.89
LINS1-206ENST00000559827 DCAF8L2P0C7V8 631 aa39.16■■■■□ 3.86
LINS1-206ENST00000559827 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
LINS1-206ENST00000559827 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
LINS1-206ENST00000559827 BICRAQ9NZM4 1560 aa38.2■■■■□ 3.71
LINS1-206ENST00000559827 PABPN1Q86U42 306 aaKnown RBP eCLIP37.97■■■■□ 3.67
LINS1-206ENST00000559827 SHROOM4Q9ULL8 1493 aa37.91■■■■□ 3.66
LINS1-206ENST00000559827 DNAJC5BQ9UF47 199 aa37.26■■■■□ 3.56
LINS1-206ENST00000559827 EIF4G1Q04637 1599 aaKnown RBP37.14■■■■□ 3.54
LINS1-206ENST00000559827 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.5
LINS1-206ENST00000559827 CECR2Q9BXF3 1484 aa36.82■■■■□ 3.49
LINS1-206ENST00000559827 BAZ1AQ9NRL2 1556 aaPredicted RBP36.73■■■■□ 3.47
LINS1-206ENST00000559827 SMARCA4P51532 1647 aa36.73■■■■□ 3.47
LINS1-206ENST00000559827 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
LINS1-206ENST00000559827 PEG3Q9GZU2 1588 aa36.43■■■■□ 3.42
LINS1-206ENST00000559827 SMARCA2P51531 1590 aa36.41■■■■□ 3.42
LINS1-206ENST00000559827 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
LINS1-206ENST00000559827 NCAPD3P42695 1498 aa36.36■■■■□ 3.41
LINS1-206ENST00000559827 HMGXB3Q12766 1538 aa36.27■■■■□ 3.4
LINS1-206ENST00000559827 RSF1Q96T23 1441 aaPredicted RBP36.18■■■■□ 3.38
LINS1-206ENST00000559827 WIZO95785 1651 aa36.13■■■■□ 3.37
LINS1-206ENST00000559827 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
LINS1-206ENST00000559827 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
LINS1-206ENST00000559827 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
LINS1-206ENST00000559827 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
LINS1-206ENST00000559827 CCDC88BA6NC98 1476 aa35.32■■■■□ 3.24
LINS1-206ENST00000559827 NESP48681 1621 aa35.31■■■■□ 3.24
LINS1-206ENST00000559827 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
LINS1-206ENST00000559827 CFTRP13569 1480 aa35.17■■■■□ 3.22
LINS1-206ENST00000559827 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
LINS1-206ENST00000559827 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
LINS1-206ENST00000559827 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
LINS1-206ENST00000559827 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
LINS1-206ENST00000559827 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
LINS1-206ENST00000559827 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
LINS1-206ENST00000559827 CEP164Q9UPV0 1460 aa34.81■■■■□ 3.16
LINS1-206ENST00000559827 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
LINS1-206ENST00000559827 CUX2O14529 1486 aa34.65■■■■□ 3.14
LINS1-206ENST00000559827 WDR62O43379 1518 aa34.63■■■■□ 3.13
LINS1-206ENST00000559827 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
LINS1-206ENST00000559827 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
LINS1-206ENST00000559827 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
LINS1-206ENST00000559827 TOPBP1Q92547 1522 aa34.37■■■■□ 3.09
LINS1-206ENST00000559827 CUX1P39880 1505 aa34.24■■■■□ 3.07
LINS1-206ENST00000559827 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.051e-6■■■■■ 58.5
LINS1-206ENST00000559827 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
LINS1-206ENST00000559827 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
LINS1-206ENST00000559827 IFT140Q96RY7 1462 aa34.07■■■■□ 3.05
LINS1-206ENST00000559827 TOP2BQ02880 1626 aa34.07■■■■□ 3.04
LINS1-206ENST00000559827 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
LINS1-206ENST00000559827 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
LINS1-206ENST00000559827 TARBP1Q13395 1621 aaKnown RBP34.02■■■■□ 3.04
LINS1-206ENST00000559827 SOGA1O94964 1423 aa33.9■■■■□ 3.02
LINS1-206ENST00000559827 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
LINS1-206ENST00000559827 WDR97A6NE52 1622 aa33.86■■■■□ 3.01
LINS1-206ENST00000559827 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
LINS1-206ENST00000559827 ZNF608Q9ULD9 1512 aaPredicted RBP33.85■■■■□ 3.01
LINS1-206ENST00000559827 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
LINS1-206ENST00000559827 ABCA10Q8WWZ4 1543 aa33.78■■■■□ 3
LINS1-206ENST00000559827 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
LINS1-206ENST00000559827 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
LINS1-206ENST00000559827 TDRD9Q8NDG6 1382 aaKnown RBP33.64■■■□□ 2.98
LINS1-206ENST00000559827 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
LINS1-206ENST00000559827 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
LINS1-206ENST00000559827 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
LINS1-206ENST00000559827 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
LINS1-206ENST00000559827 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
LINS1-206ENST00000559827 ERICH3Q5RHP9 1530 aa33.39■■■□□ 2.94
LINS1-206ENST00000559827 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
LINS1-206ENST00000559827 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
LINS1-206ENST00000559827 CHD1O14646 1710 aa33.31■■■□□ 2.92
LINS1-206ENST00000559827 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
LINS1-206ENST00000559827 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
LINS1-206ENST00000559827 CHIC1Q5VXU3 224 aa33.23■■■□□ 2.91
LINS1-206ENST00000559827 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
LINS1-206ENST00000559827 CUL7Q14999 1698 aa33.17■■■□□ 2.9
LINS1-206ENST00000559827 IGF1RP08069 1367 aa33.17■■■□□ 2.9
LINS1-206ENST00000559827 OSCARQ8IYS5 282 aa33.12■■■□□ 2.89
LINS1-206ENST00000559827 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
LINS1-206ENST00000559827 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
LINS1-206ENST00000559827 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
LINS1-206ENST00000559827 FBLN2P98095 1184 aa33.08■■■□□ 2.89
LINS1-206ENST00000559827 CLASP1Q7Z460 1538 aa32.99■■■□□ 2.87
LINS1-206ENST00000559827 EEA1Q15075 1411 aa32.98■■■□□ 2.87
LINS1-206ENST00000559827 NUP160Q12769 1436 aa32.96■■■□□ 2.87
LINS1-206ENST00000559827 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
LINS1-206ENST00000559827 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
LINS1-206ENST00000559827 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
LINS1-206ENST00000559827 RAPGEF2Q9Y4G8 1499 aa32.84■■■□□ 2.85
LINS1-206ENST00000559827 CSRNP3Q8WYN3 585 aa32.77■■■□□ 2.84
LINS1-206ENST00000559827 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
LINS1-206ENST00000559827 ARHGEF11O15085 1522 aa32.7■■■□□ 2.83
LINS1-206ENST00000559827 KIAA0586Q9BVV6 1533 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 317.9 ms