RNA–Protein interactions for RNA: ENST00000559680.1

NTRK3-215, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene NTRK3, Length 441 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-215ENST00000559680 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
NTRK3-215ENST00000559680 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
NTRK3-215ENST00000559680 ABCC9O60706 1549 aa21.74■■□□□ 1.07
NTRK3-215ENST00000559680 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
NTRK3-215ENST00000559680 NACADO15069 1562 aa21.15■□□□□ 0.98
NTRK3-215ENST00000559680 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
NTRK3-215ENST00000559680 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
NTRK3-215ENST00000559680 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
NTRK3-215ENST00000559680 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
NTRK3-215ENST00000559680 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
NTRK3-215ENST00000559680 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
NTRK3-215ENST00000559680 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
NTRK3-215ENST00000559680 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
NTRK3-215ENST00000559680 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
NTRK3-215ENST00000559680 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
NTRK3-215ENST00000559680 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
NTRK3-215ENST00000559680 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
NTRK3-215ENST00000559680 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
NTRK3-215ENST00000559680 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
NTRK3-215ENST00000559680 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
NTRK3-215ENST00000559680 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
NTRK3-215ENST00000559680 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
NTRK3-215ENST00000559680 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
NTRK3-215ENST00000559680 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
NTRK3-215ENST00000559680 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
NTRK3-215ENST00000559680 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
NTRK3-215ENST00000559680 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
NTRK3-215ENST00000559680 WIZO95785 1651 aa19.4■□□□□ 0.7
NTRK3-215ENST00000559680 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
NTRK3-215ENST00000559680 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
NTRK3-215ENST00000559680 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
NTRK3-215ENST00000559680 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
NTRK3-215ENST00000559680 LAMC3Q9Y6N6 1575 aa18.96■□□□□ 0.63
NTRK3-215ENST00000559680 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
NTRK3-215ENST00000559680 NESP48681 1621 aa18.86■□□□□ 0.61
NTRK3-215ENST00000559680 CFTRP13569 1480 aa18.86■□□□□ 0.61
NTRK3-215ENST00000559680 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
NTRK3-215ENST00000559680 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
NTRK3-215ENST00000559680 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
NTRK3-215ENST00000559680 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
NTRK3-215ENST00000559680 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
NTRK3-215ENST00000559680 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
NTRK3-215ENST00000559680 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
NTRK3-215ENST00000559680 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
NTRK3-215ENST00000559680 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
NTRK3-215ENST00000559680 WDR62O43379 1518 aa18.51■□□□□ 0.55
NTRK3-215ENST00000559680 CUX2O14529 1486 aa18.5■□□□□ 0.55
NTRK3-215ENST00000559680 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
NTRK3-215ENST00000559680 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
NTRK3-215ENST00000559680 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
NTRK3-215ENST00000559680 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
NTRK3-215ENST00000559680 CUX1P39880 1505 aa18.37■□□□□ 0.53
NTRK3-215ENST00000559680 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
NTRK3-215ENST00000559680 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
NTRK3-215ENST00000559680 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
NTRK3-215ENST00000559680 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
NTRK3-215ENST00000559680 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
NTRK3-215ENST00000559680 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
NTRK3-215ENST00000559680 SOGA1O94964 1423 aa18.23■□□□□ 0.51
NTRK3-215ENST00000559680 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
NTRK3-215ENST00000559680 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
NTRK3-215ENST00000559680 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
NTRK3-215ENST00000559680 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
NTRK3-215ENST00000559680 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
NTRK3-215ENST00000559680 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
NTRK3-215ENST00000559680 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
NTRK3-215ENST00000559680 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
NTRK3-215ENST00000559680 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
NTRK3-215ENST00000559680 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
NTRK3-215ENST00000559680 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
NTRK3-215ENST00000559680 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
NTRK3-215ENST00000559680 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
NTRK3-215ENST00000559680 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
NTRK3-215ENST00000559680 PBRM1Q86U86 1689 aa18■□□□□ 0.47
NTRK3-215ENST00000559680 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
NTRK3-215ENST00000559680 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
NTRK3-215ENST00000559680 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
NTRK3-215ENST00000559680 EEA1Q15075 1411 aa17.89■□□□□ 0.45
NTRK3-215ENST00000559680 CUL7Q14999 1698 aa17.87■□□□□ 0.45
NTRK3-215ENST00000559680 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
NTRK3-215ENST00000559680 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
NTRK3-215ENST00000559680 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
NTRK3-215ENST00000559680 IGF1RP08069 1367 aa17.84■□□□□ 0.45
NTRK3-215ENST00000559680 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
NTRK3-215ENST00000559680 CHD1O14646 1710 aa17.82■□□□□ 0.44
NTRK3-215ENST00000559680 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
NTRK3-215ENST00000559680 FBLN2P98095 1184 aa17.81■□□□□ 0.44
NTRK3-215ENST00000559680 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
NTRK3-215ENST00000559680 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
NTRK3-215ENST00000559680 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
NTRK3-215ENST00000559680 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
NTRK3-215ENST00000559680 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
NTRK3-215ENST00000559680 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
NTRK3-215ENST00000559680 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
NTRK3-215ENST00000559680 NUP160Q12769 1436 aa17.66■□□□□ 0.42
NTRK3-215ENST00000559680 KIF21BO75037 1637 aa17.64■□□□□ 0.41
NTRK3-215ENST00000559680 CEP170Q5SW79 1584 aa17.63■□□□□ 0.41
NTRK3-215ENST00000559680 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
NTRK3-215ENST00000559680 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
NTRK3-215ENST00000559680 CTTNBP2Q8WZ74 1663 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms