RNA–Protein interactions for RNA: ENST00000559626.1

GCNT3-205, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

TSL 1 (best)

Gene GCNT3, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-205ENST00000559626 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
GCNT3-205ENST00000559626 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
GCNT3-205ENST00000559626 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
GCNT3-205ENST00000559626 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
GCNT3-205ENST00000559626 ABCC9O60706 1549 aa14.61□□□□□ -0.07
GCNT3-205ENST00000559626 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
GCNT3-205ENST00000559626 NACADO15069 1562 aa14.33□□□□□ -0.12
GCNT3-205ENST00000559626 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
GCNT3-205ENST00000559626 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
GCNT3-205ENST00000559626 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
GCNT3-205ENST00000559626 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
GCNT3-205ENST00000559626 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
GCNT3-205ENST00000559626 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
GCNT3-205ENST00000559626 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
GCNT3-205ENST00000559626 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
GCNT3-205ENST00000559626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
GCNT3-205ENST00000559626 EIF4G1Q04637 1599 aaKnown RBP13.38□□□□□ -0.27
GCNT3-205ENST00000559626 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
GCNT3-205ENST00000559626 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.29
GCNT3-205ENST00000559626 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
GCNT3-205ENST00000559626 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
GCNT3-205ENST00000559626 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
GCNT3-205ENST00000559626 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
GCNT3-205ENST00000559626 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
GCNT3-205ENST00000559626 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
GCNT3-205ENST00000559626 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
GCNT3-205ENST00000559626 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
GCNT3-205ENST00000559626 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
GCNT3-205ENST00000559626 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
GCNT3-205ENST00000559626 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
GCNT3-205ENST00000559626 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
GCNT3-205ENST00000559626 WIZO95785 1651 aa12.97□□□□□ -0.33
GCNT3-205ENST00000559626 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
GCNT3-205ENST00000559626 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
GCNT3-205ENST00000559626 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
GCNT3-205ENST00000559626 CADPSQ9ULU8 1353 aa12.8□□□□□ -0.36
GCNT3-205ENST00000559626 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
GCNT3-205ENST00000559626 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
GCNT3-205ENST00000559626 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
GCNT3-205ENST00000559626 CFTRP13569 1480 aa12.73□□□□□ -0.37
GCNT3-205ENST00000559626 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
GCNT3-205ENST00000559626 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
GCNT3-205ENST00000559626 NESP48681 1621 aa12.63□□□□□ -0.39
GCNT3-205ENST00000559626 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
GCNT3-205ENST00000559626 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
GCNT3-205ENST00000559626 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
GCNT3-205ENST00000559626 CUX2O14529 1486 aa12.58□□□□□ -0.4
GCNT3-205ENST00000559626 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
GCNT3-205ENST00000559626 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
GCNT3-205ENST00000559626 WDR62O43379 1518 aa12.49□□□□□ -0.41
GCNT3-205ENST00000559626 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
GCNT3-205ENST00000559626 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
GCNT3-205ENST00000559626 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
GCNT3-205ENST00000559626 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
GCNT3-205ENST00000559626 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
GCNT3-205ENST00000559626 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
GCNT3-205ENST00000559626 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
GCNT3-205ENST00000559626 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
GCNT3-205ENST00000559626 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
GCNT3-205ENST00000559626 CUX1P39880 1505 aa12.31□□□□□ -0.44
GCNT3-205ENST00000559626 SOGA1O94964 1423 aa12.3□□□□□ -0.44
GCNT3-205ENST00000559626 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
GCNT3-205ENST00000559626 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.44
GCNT3-205ENST00000559626 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
GCNT3-205ENST00000559626 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
GCNT3-205ENST00000559626 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
GCNT3-205ENST00000559626 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
GCNT3-205ENST00000559626 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
GCNT3-205ENST00000559626 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
GCNT3-205ENST00000559626 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
GCNT3-205ENST00000559626 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
GCNT3-205ENST00000559626 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
GCNT3-205ENST00000559626 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
GCNT3-205ENST00000559626 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
GCNT3-205ENST00000559626 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
GCNT3-205ENST00000559626 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
GCNT3-205ENST00000559626 TDRD9Q8NDG6 1382 aaKnown RBP12.13□□□□□ -0.47
GCNT3-205ENST00000559626 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
GCNT3-205ENST00000559626 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
GCNT3-205ENST00000559626 EEA1Q15075 1411 aa12.11□□□□□ -0.47
GCNT3-205ENST00000559626 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
GCNT3-205ENST00000559626 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
GCNT3-205ENST00000559626 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
GCNT3-205ENST00000559626 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
GCNT3-205ENST00000559626 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
GCNT3-205ENST00000559626 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
GCNT3-205ENST00000559626 CUL7Q14999 1698 aa12.05□□□□□ -0.48
GCNT3-205ENST00000559626 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
GCNT3-205ENST00000559626 IGF1RP08069 1367 aa12.01□□□□□ -0.49
GCNT3-205ENST00000559626 FBLN2P98095 1184 aa12□□□□□ -0.49
GCNT3-205ENST00000559626 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
GCNT3-205ENST00000559626 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
GCNT3-205ENST00000559626 GRIN2AQ12879 1464 aa11.96□□□□□ -0.49
GCNT3-205ENST00000559626 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
GCNT3-205ENST00000559626 CHD1O14646 1710 aa11.96□□□□□ -0.49
GCNT3-205ENST00000559626 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
GCNT3-205ENST00000559626 NUP160Q12769 1436 aa11.92□□□□□ -0.5
GCNT3-205ENST00000559626 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
GCNT3-205ENST00000559626 FOXD1Q16676 465 aa11.89□□□□□ -0.51
GCNT3-205ENST00000559626 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms