RNA–Protein interactions for RNA: ENST00000559587.1

RORA-211, Transcript of RAR related orphan receptor A, humanhuman

TSL 5

Gene RORA, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-211ENST00000559587 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
RORA-211ENST00000559587 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
RORA-211ENST00000559587 ABCC9O60706 1549 aa24.38■■□□□ 1.49
RORA-211ENST00000559587 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
RORA-211ENST00000559587 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
RORA-211ENST00000559587 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
RORA-211ENST00000559587 NACADO15069 1562 aa23.73■■□□□ 1.39
RORA-211ENST00000559587 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
RORA-211ENST00000559587 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
RORA-211ENST00000559587 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
RORA-211ENST00000559587 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
RORA-211ENST00000559587 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
RORA-211ENST00000559587 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
RORA-211ENST00000559587 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
RORA-211ENST00000559587 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
RORA-211ENST00000559587 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
RORA-211ENST00000559587 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
RORA-211ENST00000559587 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
RORA-211ENST00000559587 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
RORA-211ENST00000559587 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
RORA-211ENST00000559587 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
RORA-211ENST00000559587 SMARCA2P51531 1590 aa21.95■■□□□ 1.11
RORA-211ENST00000559587 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
RORA-211ENST00000559587 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
RORA-211ENST00000559587 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
RORA-211ENST00000559587 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
RORA-211ENST00000559587 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
RORA-211ENST00000559587 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
RORA-211ENST00000559587 WIZO95785 1651 aa21.72■■□□□ 1.07
RORA-211ENST00000559587 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
RORA-211ENST00000559587 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
RORA-211ENST00000559587 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
RORA-211ENST00000559587 CADPSQ9ULU8 1353 aa21.27■■□□□ 1
RORA-211ENST00000559587 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
RORA-211ENST00000559587 CFTRP13569 1480 aa21.21■□□□□ 0.99
RORA-211ENST00000559587 NESP48681 1621 aa21.16■□□□□ 0.98
RORA-211ENST00000559587 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
RORA-211ENST00000559587 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
RORA-211ENST00000559587 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
RORA-211ENST00000559587 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
RORA-211ENST00000559587 PRDM2Q13029 1718 aa20.94■□□□□ 0.94
RORA-211ENST00000559587 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
RORA-211ENST00000559587 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
RORA-211ENST00000559587 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
RORA-211ENST00000559587 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
RORA-211ENST00000559587 WDR62O43379 1518 aa20.78■□□□□ 0.92
RORA-211ENST00000559587 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
RORA-211ENST00000559587 CUX2O14529 1486 aa20.74■□□□□ 0.91
RORA-211ENST00000559587 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
RORA-211ENST00000559587 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
RORA-211ENST00000559587 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
RORA-211ENST00000559587 CUX1P39880 1505 aa20.63■□□□□ 0.89
RORA-211ENST00000559587 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
RORA-211ENST00000559587 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
RORA-211ENST00000559587 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
RORA-211ENST00000559587 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
RORA-211ENST00000559587 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
RORA-211ENST00000559587 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
RORA-211ENST00000559587 SOGA1O94964 1423 aa20.47■□□□□ 0.87
RORA-211ENST00000559587 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
RORA-211ENST00000559587 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
RORA-211ENST00000559587 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
RORA-211ENST00000559587 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
RORA-211ENST00000559587 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
RORA-211ENST00000559587 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
RORA-211ENST00000559587 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
RORA-211ENST00000559587 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
RORA-211ENST00000559587 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
RORA-211ENST00000559587 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.831e-6■□□□□ 10.6
RORA-211ENST00000559587 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
RORA-211ENST00000559587 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
RORA-211ENST00000559587 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
RORA-211ENST00000559587 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
RORA-211ENST00000559587 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
RORA-211ENST00000559587 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
RORA-211ENST00000559587 EEA1Q15075 1411 aa20.13■□□□□ 0.81
RORA-211ENST00000559587 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
RORA-211ENST00000559587 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
RORA-211ENST00000559587 IGF1RP08069 1367 aa20.08■□□□□ 0.8
RORA-211ENST00000559587 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
RORA-211ENST00000559587 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
RORA-211ENST00000559587 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
RORA-211ENST00000559587 RUSC2Q8N2Y8 1516 aa20.03■□□□□ 0.8
RORA-211ENST00000559587 CUL7Q14999 1698 aa20.01■□□□□ 0.79
RORA-211ENST00000559587 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
RORA-211ENST00000559587 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
RORA-211ENST00000559587 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
RORA-211ENST00000559587 FBLN2P98095 1184 aa19.96■□□□□ 0.79
RORA-211ENST00000559587 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
RORA-211ENST00000559587 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
RORA-211ENST00000559587 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
RORA-211ENST00000559587 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
RORA-211ENST00000559587 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
RORA-211ENST00000559587 CHD1O14646 1710 aa19.87■□□□□ 0.77
RORA-211ENST00000559587 NUP160Q12769 1436 aa19.86■□□□□ 0.77
RORA-211ENST00000559587 KIF21BO75037 1637 aa19.81■□□□□ 0.76
RORA-211ENST00000559587 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
RORA-211ENST00000559587 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
RORA-211ENST00000559587 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
RORA-211ENST00000559587 GOLGA3Q08378 1498 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms