RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-208ENST00000559573 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
FAM227B-208ENST00000559573 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
FAM227B-208ENST00000559573 ABCC9O60706 1549 aa21.22■□□□□ 0.99
FAM227B-208ENST00000559573 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
FAM227B-208ENST00000559573 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
FAM227B-208ENST00000559573 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
FAM227B-208ENST00000559573 NACADO15069 1562 aa20.08■□□□□ 0.8
FAM227B-208ENST00000559573 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
FAM227B-208ENST00000559573 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
FAM227B-208ENST00000559573 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
FAM227B-208ENST00000559573 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
FAM227B-208ENST00000559573 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
FAM227B-208ENST00000559573 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
FAM227B-208ENST00000559573 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
FAM227B-208ENST00000559573 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
FAM227B-208ENST00000559573 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
FAM227B-208ENST00000559573 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
FAM227B-208ENST00000559573 CC2D2AQ9P2K1 1620 aa19.08■□□□□ 0.64
FAM227B-208ENST00000559573 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.61
FAM227B-208ENST00000559573 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
FAM227B-208ENST00000559573 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
FAM227B-208ENST00000559573 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
FAM227B-208ENST00000559573 WIZO95785 1651 aa18.67■□□□□ 0.58
FAM227B-208ENST00000559573 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
FAM227B-208ENST00000559573 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
FAM227B-208ENST00000559573 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
FAM227B-208ENST00000559573 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
FAM227B-208ENST00000559573 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
FAM227B-208ENST00000559573 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
FAM227B-208ENST00000559573 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
FAM227B-208ENST00000559573 NESP48681 1621 aa18.43■□□□□ 0.54
FAM227B-208ENST00000559573 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.52
FAM227B-208ENST00000559573 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
FAM227B-208ENST00000559573 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
FAM227B-208ENST00000559573 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
FAM227B-208ENST00000559573 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
FAM227B-208ENST00000559573 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
FAM227B-208ENST00000559573 CFTRP13569 1480 aa18.01■□□□□ 0.47
FAM227B-208ENST00000559573 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
FAM227B-208ENST00000559573 FANCD2Q9BXW9 1451 aa17.97■□□□□ 0.47
FAM227B-208ENST00000559573 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
FAM227B-208ENST00000559573 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.45
FAM227B-208ENST00000559573 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.44
FAM227B-208ENST00000559573 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
FAM227B-208ENST00000559573 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
FAM227B-208ENST00000559573 CUX2O14529 1486 aa17.74■□□□□ 0.43
FAM227B-208ENST00000559573 WDR62O43379 1518 aa17.73■□□□□ 0.43
FAM227B-208ENST00000559573 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
FAM227B-208ENST00000559573 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
FAM227B-208ENST00000559573 CUX1P39880 1505 aa17.63■□□□□ 0.41
FAM227B-208ENST00000559573 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
FAM227B-208ENST00000559573 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
FAM227B-208ENST00000559573 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
FAM227B-208ENST00000559573 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
FAM227B-208ENST00000559573 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
FAM227B-208ENST00000559573 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
FAM227B-208ENST00000559573 AQRO60306 1485 aaKnown RBP eCLIP17.52■□□□□ 0.4
FAM227B-208ENST00000559573 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
FAM227B-208ENST00000559573 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
FAM227B-208ENST00000559573 SOGA1O94964 1423 aa17.49■□□□□ 0.39
FAM227B-208ENST00000559573 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
FAM227B-208ENST00000559573 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
FAM227B-208ENST00000559573 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
FAM227B-208ENST00000559573 FBLN2P98095 1184 aa17.41■□□□□ 0.38
FAM227B-208ENST00000559573 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
FAM227B-208ENST00000559573 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
FAM227B-208ENST00000559573 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
FAM227B-208ENST00000559573 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
FAM227B-208ENST00000559573 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
FAM227B-208ENST00000559573 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.35
FAM227B-208ENST00000559573 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.35
FAM227B-208ENST00000559573 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
FAM227B-208ENST00000559573 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
FAM227B-208ENST00000559573 CHD1O14646 1710 aa17.22■□□□□ 0.35
FAM227B-208ENST00000559573 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
FAM227B-208ENST00000559573 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
FAM227B-208ENST00000559573 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
FAM227B-208ENST00000559573 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
FAM227B-208ENST00000559573 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
FAM227B-208ENST00000559573 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
FAM227B-208ENST00000559573 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
FAM227B-208ENST00000559573 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
FAM227B-208ENST00000559573 IGF1RP08069 1367 aa17.08■□□□□ 0.33
FAM227B-208ENST00000559573 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
FAM227B-208ENST00000559573 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
FAM227B-208ENST00000559573 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
FAM227B-208ENST00000559573 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
FAM227B-208ENST00000559573 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
FAM227B-208ENST00000559573 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
FAM227B-208ENST00000559573 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
FAM227B-208ENST00000559573 CEP170Q5SW79 1584 aa16.99■□□□□ 0.31
FAM227B-208ENST00000559573 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
FAM227B-208ENST00000559573 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
FAM227B-208ENST00000559573 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
FAM227B-208ENST00000559573 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
FAM227B-208ENST00000559573 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
FAM227B-208ENST00000559573 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
FAM227B-208ENST00000559573 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
FAM227B-208ENST00000559573 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
FAM227B-208ENST00000559573 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms