RNA–Protein interactions for RNA: ENST00000559338.1

MEIS3-205, Transcript of Meis homeobox 3, humanhuman

TSL 5

Gene MEIS3, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-205ENST00000559338 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
MEIS3-205ENST00000559338 ABCC9O60706 1549 aa28.94■■■□□ 2.22
MEIS3-205ENST00000559338 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
MEIS3-205ENST00000559338 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
MEIS3-205ENST00000559338 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
MEIS3-205ENST00000559338 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
MEIS3-205ENST00000559338 NACADO15069 1562 aa26.91■■□□□ 1.9
MEIS3-205ENST00000559338 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
MEIS3-205ENST00000559338 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
MEIS3-205ENST00000559338 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
MEIS3-205ENST00000559338 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
MEIS3-205ENST00000559338 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
MEIS3-205ENST00000559338 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
MEIS3-205ENST00000559338 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
MEIS3-205ENST00000559338 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
MEIS3-205ENST00000559338 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
MEIS3-205ENST00000559338 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
MEIS3-205ENST00000559338 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
MEIS3-205ENST00000559338 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
MEIS3-205ENST00000559338 CUX2O14529 1486 aa25.19■■□□□ 1.62
MEIS3-205ENST00000559338 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
MEIS3-205ENST00000559338 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
MEIS3-205ENST00000559338 ATAD2BQ9ULI0 1458 aa24.79■■□□□ 1.56
MEIS3-205ENST00000559338 NESP48681 1621 aa24.71■■□□□ 1.55
MEIS3-205ENST00000559338 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
MEIS3-205ENST00000559338 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
MEIS3-205ENST00000559338 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
MEIS3-205ENST00000559338 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
MEIS3-205ENST00000559338 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
MEIS3-205ENST00000559338 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
MEIS3-205ENST00000559338 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
MEIS3-205ENST00000559338 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
MEIS3-205ENST00000559338 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
MEIS3-205ENST00000559338 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
MEIS3-205ENST00000559338 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
MEIS3-205ENST00000559338 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
MEIS3-205ENST00000559338 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
MEIS3-205ENST00000559338 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
MEIS3-205ENST00000559338 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
MEIS3-205ENST00000559338 WDR62O43379 1518 aa24.05■■□□□ 1.44
MEIS3-205ENST00000559338 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
MEIS3-205ENST00000559338 WIZO95785 1651 aa23.84■■□□□ 1.41
MEIS3-205ENST00000559338 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
MEIS3-205ENST00000559338 CFTRP13569 1480 aa23.77■■□□□ 1.4
MEIS3-205ENST00000559338 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
MEIS3-205ENST00000559338 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
MEIS3-205ENST00000559338 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
MEIS3-205ENST00000559338 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
MEIS3-205ENST00000559338 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
MEIS3-205ENST00000559338 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
MEIS3-205ENST00000559338 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
MEIS3-205ENST00000559338 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
MEIS3-205ENST00000559338 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
MEIS3-205ENST00000559338 IFT140Q96RY7 1462 aa23.47■■□□□ 1.35
MEIS3-205ENST00000559338 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
MEIS3-205ENST00000559338 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
MEIS3-205ENST00000559338 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
MEIS3-205ENST00000559338 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
MEIS3-205ENST00000559338 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
MEIS3-205ENST00000559338 FBLN2P98095 1184 aa23.23■■□□□ 1.31
MEIS3-205ENST00000559338 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
MEIS3-205ENST00000559338 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
MEIS3-205ENST00000559338 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
MEIS3-205ENST00000559338 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
MEIS3-205ENST00000559338 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
MEIS3-205ENST00000559338 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.29
MEIS3-205ENST00000559338 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
MEIS3-205ENST00000559338 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
MEIS3-205ENST00000559338 CHD1O14646 1710 aa23.01■■□□□ 1.27
MEIS3-205ENST00000559338 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
MEIS3-205ENST00000559338 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
MEIS3-205ENST00000559338 SOGA1O94964 1423 aa22.99■■□□□ 1.27
MEIS3-205ENST00000559338 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
MEIS3-205ENST00000559338 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
MEIS3-205ENST00000559338 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
MEIS3-205ENST00000559338 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
MEIS3-205ENST00000559338 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
MEIS3-205ENST00000559338 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
MEIS3-205ENST00000559338 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MEIS3-205ENST00000559338 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
MEIS3-205ENST00000559338 CUX1P39880 1505 aa22.77■■□□□ 1.24
MEIS3-205ENST00000559338 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
MEIS3-205ENST00000559338 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
MEIS3-205ENST00000559338 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
MEIS3-205ENST00000559338 NUP160Q12769 1436 aa22.5■■□□□ 1.19
MEIS3-205ENST00000559338 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
MEIS3-205ENST00000559338 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
MEIS3-205ENST00000559338 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
MEIS3-205ENST00000559338 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
MEIS3-205ENST00000559338 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
MEIS3-205ENST00000559338 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
MEIS3-205ENST00000559338 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
MEIS3-205ENST00000559338 JPH4Q96JJ6 628 aa22.37■■□□□ 1.17
MEIS3-205ENST00000559338 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
MEIS3-205ENST00000559338 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
MEIS3-205ENST00000559338 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.17
MEIS3-205ENST00000559338 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
MEIS3-205ENST00000559338 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
MEIS3-205ENST00000559338 ABCC10Q5T3U5 1492 aa22.3■■□□□ 1.16
MEIS3-205ENST00000559338 ILDR1Q86SU0 546 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms