RNA–Protein interactions for RNA: ENST00000559252.1

FAM138E-202, Transcript of family with sequence similarity 138 member E, humanhuman

TSL 2

Gene FAM138E, Length 590 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM138E-202ENST00000559252 NISCHQ9Y2I1 1504 aa23.26■■□□□ 1.31
FAM138E-202ENST00000559252 ABCC9O60706 1549 aa21.48■■□□□ 1.03
FAM138E-202ENST00000559252 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
FAM138E-202ENST00000559252 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
FAM138E-202ENST00000559252 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.84
FAM138E-202ENST00000559252 NACADO15069 1562 aa20.01■□□□□ 0.79
FAM138E-202ENST00000559252 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
FAM138E-202ENST00000559252 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
FAM138E-202ENST00000559252 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
FAM138E-202ENST00000559252 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
FAM138E-202ENST00000559252 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
FAM138E-202ENST00000559252 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
FAM138E-202ENST00000559252 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
FAM138E-202ENST00000559252 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
FAM138E-202ENST00000559252 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
FAM138E-202ENST00000559252 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
FAM138E-202ENST00000559252 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
FAM138E-202ENST00000559252 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
FAM138E-202ENST00000559252 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
FAM138E-202ENST00000559252 CUX2O14529 1486 aa18.79■□□□□ 0.6
FAM138E-202ENST00000559252 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
FAM138E-202ENST00000559252 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
FAM138E-202ENST00000559252 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
FAM138E-202ENST00000559252 NESP48681 1621 aa18.31■□□□□ 0.52
FAM138E-202ENST00000559252 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
FAM138E-202ENST00000559252 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
FAM138E-202ENST00000559252 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
FAM138E-202ENST00000559252 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
FAM138E-202ENST00000559252 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
FAM138E-202ENST00000559252 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
FAM138E-202ENST00000559252 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
FAM138E-202ENST00000559252 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
FAM138E-202ENST00000559252 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
FAM138E-202ENST00000559252 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
FAM138E-202ENST00000559252 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
FAM138E-202ENST00000559252 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
FAM138E-202ENST00000559252 WDR62O43379 1518 aa17.89■□□□□ 0.45
FAM138E-202ENST00000559252 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
FAM138E-202ENST00000559252 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
FAM138E-202ENST00000559252 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
FAM138E-202ENST00000559252 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
FAM138E-202ENST00000559252 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
FAM138E-202ENST00000559252 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
FAM138E-202ENST00000559252 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
FAM138E-202ENST00000559252 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
FAM138E-202ENST00000559252 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
FAM138E-202ENST00000559252 CFTRP13569 1480 aa17.61■□□□□ 0.41
FAM138E-202ENST00000559252 WIZO95785 1651 aa17.58■□□□□ 0.4
FAM138E-202ENST00000559252 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
FAM138E-202ENST00000559252 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
FAM138E-202ENST00000559252 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
FAM138E-202ENST00000559252 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
FAM138E-202ENST00000559252 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
FAM138E-202ENST00000559252 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
FAM138E-202ENST00000559252 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
FAM138E-202ENST00000559252 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
FAM138E-202ENST00000559252 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
FAM138E-202ENST00000559252 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
FAM138E-202ENST00000559252 CHD1O14646 1710 aa17.29■□□□□ 0.36
FAM138E-202ENST00000559252 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
FAM138E-202ENST00000559252 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
FAM138E-202ENST00000559252 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
FAM138E-202ENST00000559252 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
FAM138E-202ENST00000559252 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
FAM138E-202ENST00000559252 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
FAM138E-202ENST00000559252 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
FAM138E-202ENST00000559252 FBLN2P98095 1184 aa17.14■□□□□ 0.33
FAM138E-202ENST00000559252 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
FAM138E-202ENST00000559252 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
FAM138E-202ENST00000559252 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
FAM138E-202ENST00000559252 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
FAM138E-202ENST00000559252 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
FAM138E-202ENST00000559252 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
FAM138E-202ENST00000559252 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
FAM138E-202ENST00000559252 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
FAM138E-202ENST00000559252 SOGA1O94964 1423 aa16.96■□□□□ 0.31
FAM138E-202ENST00000559252 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
FAM138E-202ENST00000559252 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
FAM138E-202ENST00000559252 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
FAM138E-202ENST00000559252 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
FAM138E-202ENST00000559252 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
FAM138E-202ENST00000559252 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
FAM138E-202ENST00000559252 CUX1P39880 1505 aa16.8■□□□□ 0.28
FAM138E-202ENST00000559252 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
FAM138E-202ENST00000559252 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
FAM138E-202ENST00000559252 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
FAM138E-202ENST00000559252 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
FAM138E-202ENST00000559252 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
FAM138E-202ENST00000559252 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
FAM138E-202ENST00000559252 NUP160Q12769 1436 aa16.65■□□□□ 0.26
FAM138E-202ENST00000559252 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
FAM138E-202ENST00000559252 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
FAM138E-202ENST00000559252 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
FAM138E-202ENST00000559252 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
FAM138E-202ENST00000559252 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
FAM138E-202ENST00000559252 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
FAM138E-202ENST00000559252 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
FAM138E-202ENST00000559252 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
FAM138E-202ENST00000559252 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
FAM138E-202ENST00000559252 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms