RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-215ENST00000559201 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
LRRC49-215ENST00000559201 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
LRRC49-215ENST00000559201 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
LRRC49-215ENST00000559201 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
LRRC49-215ENST00000559201 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
LRRC49-215ENST00000559201 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
LRRC49-215ENST00000559201 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
LRRC49-215ENST00000559201 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
LRRC49-215ENST00000559201 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
LRRC49-215ENST00000559201 NACADO15069 1562 aa18.97■□□□□ 0.63
LRRC49-215ENST00000559201 ABCC9O60706 1549 aa18.95■□□□□ 0.62
LRRC49-215ENST00000559201 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
LRRC49-215ENST00000559201 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
LRRC49-215ENST00000559201 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
LRRC49-215ENST00000559201 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
LRRC49-215ENST00000559201 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
LRRC49-215ENST00000559201 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
LRRC49-215ENST00000559201 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
LRRC49-215ENST00000559201 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
LRRC49-215ENST00000559201 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
LRRC49-215ENST00000559201 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
LRRC49-215ENST00000559201 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
LRRC49-215ENST00000559201 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
LRRC49-215ENST00000559201 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRRC49-215ENST00000559201 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
LRRC49-215ENST00000559201 WIZO95785 1651 aa17.87■□□□□ 0.45
LRRC49-215ENST00000559201 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
LRRC49-215ENST00000559201 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
LRRC49-215ENST00000559201 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
LRRC49-215ENST00000559201 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
LRRC49-215ENST00000559201 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
LRRC49-215ENST00000559201 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
LRRC49-215ENST00000559201 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
LRRC49-215ENST00000559201 FOXD1Q16676 465 aa17.62■□□□□ 0.41
LRRC49-215ENST00000559201 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
LRRC49-215ENST00000559201 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
LRRC49-215ENST00000559201 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
LRRC49-215ENST00000559201 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
LRRC49-215ENST00000559201 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
LRRC49-215ENST00000559201 EEA1Q15075 1411 aa17.29■□□□□ 0.36
LRRC49-215ENST00000559201 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.35
LRRC49-215ENST00000559201 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
LRRC49-215ENST00000559201 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
LRRC49-215ENST00000559201 CFTRP13569 1480 aa17.18■□□□□ 0.34
LRRC49-215ENST00000559201 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
LRRC49-215ENST00000559201 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
LRRC49-215ENST00000559201 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
LRRC49-215ENST00000559201 MSH5O43196 834 aa17.08■□□□□ 0.32
LRRC49-215ENST00000559201 SOGA1O94964 1423 aa17.05■□□□□ 0.32
LRRC49-215ENST00000559201 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
LRRC49-215ENST00000559201 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
LRRC49-215ENST00000559201 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
LRRC49-215ENST00000559201 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
LRRC49-215ENST00000559201 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
LRRC49-215ENST00000559201 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
LRRC49-215ENST00000559201 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
LRRC49-215ENST00000559201 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
LRRC49-215ENST00000559201 CUX1P39880 1505 aa16.9■□□□□ 0.3
LRRC49-215ENST00000559201 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
LRRC49-215ENST00000559201 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
LRRC49-215ENST00000559201 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
LRRC49-215ENST00000559201 KIF21BO75037 1637 aa16.86■□□□□ 0.29
LRRC49-215ENST00000559201 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
LRRC49-215ENST00000559201 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
LRRC49-215ENST00000559201 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
LRRC49-215ENST00000559201 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
LRRC49-215ENST00000559201 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
LRRC49-215ENST00000559201 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
LRRC49-215ENST00000559201 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
LRRC49-215ENST00000559201 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
LRRC49-215ENST00000559201 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
LRRC49-215ENST00000559201 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
LRRC49-215ENST00000559201 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
LRRC49-215ENST00000559201 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
LRRC49-215ENST00000559201 CUX2O14529 1486 aa16.68■□□□□ 0.26
LRRC49-215ENST00000559201 NESP48681 1621 aa16.67■□□□□ 0.26
LRRC49-215ENST00000559201 IGF1RP08069 1367 aa16.67■□□□□ 0.26
LRRC49-215ENST00000559201 CLIP1P30622 1438 aa16.67■□□□□ 0.26
LRRC49-215ENST00000559201 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
LRRC49-215ENST00000559201 HRCP23327 699 aa16.63■□□□□ 0.25
LRRC49-215ENST00000559201 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
LRRC49-215ENST00000559201 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
LRRC49-215ENST00000559201 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
LRRC49-215ENST00000559201 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
LRRC49-215ENST00000559201 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
LRRC49-215ENST00000559201 APLP2Q06481 763 aa16.56■□□□□ 0.24
LRRC49-215ENST00000559201 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
LRRC49-215ENST00000559201 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
LRRC49-215ENST00000559201 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
LRRC49-215ENST00000559201 CUL7Q14999 1698 aa16.43■□□□□ 0.22
LRRC49-215ENST00000559201 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
LRRC49-215ENST00000559201 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
LRRC49-215ENST00000559201 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
LRRC49-215ENST00000559201 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
LRRC49-215ENST00000559201 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
LRRC49-215ENST00000559201 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
LRRC49-215ENST00000559201 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
LRRC49-215ENST00000559201 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
LRRC49-215ENST00000559201 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
LRRC49-215ENST00000559201 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms