RNA–Protein interactions for RNA: ENST00000559200.1

GCNT3-204, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

TSL 2

Gene GCNT3, Length 667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-204ENST00000559200 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
GCNT3-204ENST00000559200 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
GCNT3-204ENST00000559200 ABCC9O60706 1549 aa20.38■□□□□ 0.85
GCNT3-204ENST00000559200 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
GCNT3-204ENST00000559200 NACADO15069 1562 aa19.8■□□□□ 0.76
GCNT3-204ENST00000559200 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
GCNT3-204ENST00000559200 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
GCNT3-204ENST00000559200 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
GCNT3-204ENST00000559200 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
GCNT3-204ENST00000559200 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
GCNT3-204ENST00000559200 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
GCNT3-204ENST00000559200 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
GCNT3-204ENST00000559200 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
GCNT3-204ENST00000559200 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
GCNT3-204ENST00000559200 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
GCNT3-204ENST00000559200 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
GCNT3-204ENST00000559200 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
GCNT3-204ENST00000559200 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
GCNT3-204ENST00000559200 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
GCNT3-204ENST00000559200 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
GCNT3-204ENST00000559200 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
GCNT3-204ENST00000559200 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
GCNT3-204ENST00000559200 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
GCNT3-204ENST00000559200 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
GCNT3-204ENST00000559200 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
GCNT3-204ENST00000559200 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
GCNT3-204ENST00000559200 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
GCNT3-204ENST00000559200 WIZO95785 1651 aa18.21■□□□□ 0.51
GCNT3-204ENST00000559200 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
GCNT3-204ENST00000559200 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
GCNT3-204ENST00000559200 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
GCNT3-204ENST00000559200 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
GCNT3-204ENST00000559200 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
GCNT3-204ENST00000559200 NESP48681 1621 aa17.71■□□□□ 0.43
GCNT3-204ENST00000559200 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
GCNT3-204ENST00000559200 CFTRP13569 1480 aa17.67■□□□□ 0.42
GCNT3-204ENST00000559200 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
GCNT3-204ENST00000559200 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
GCNT3-204ENST00000559200 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
GCNT3-204ENST00000559200 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
GCNT3-204ENST00000559200 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
GCNT3-204ENST00000559200 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
GCNT3-204ENST00000559200 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
GCNT3-204ENST00000559200 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
GCNT3-204ENST00000559200 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
GCNT3-204ENST00000559200 WDR62O43379 1518 aa17.38■□□□□ 0.37
GCNT3-204ENST00000559200 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
GCNT3-204ENST00000559200 CUX2O14529 1486 aa17.33■□□□□ 0.37
GCNT3-204ENST00000559200 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
GCNT3-204ENST00000559200 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
GCNT3-204ENST00000559200 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
GCNT3-204ENST00000559200 CUX1P39880 1505 aa17.24■□□□□ 0.35
GCNT3-204ENST00000559200 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
GCNT3-204ENST00000559200 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
GCNT3-204ENST00000559200 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
GCNT3-204ENST00000559200 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
GCNT3-204ENST00000559200 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
GCNT3-204ENST00000559200 FGD5Q6ZNL6 1462 aa17.15■□□□□ 0.34
GCNT3-204ENST00000559200 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
GCNT3-204ENST00000559200 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
GCNT3-204ENST00000559200 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
GCNT3-204ENST00000559200 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
GCNT3-204ENST00000559200 SOGA1O94964 1423 aa17.04■□□□□ 0.32
GCNT3-204ENST00000559200 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
GCNT3-204ENST00000559200 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
GCNT3-204ENST00000559200 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
GCNT3-204ENST00000559200 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
GCNT3-204ENST00000559200 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
GCNT3-204ENST00000559200 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
GCNT3-204ENST00000559200 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
GCNT3-204ENST00000559200 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
GCNT3-204ENST00000559200 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
GCNT3-204ENST00000559200 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
GCNT3-204ENST00000559200 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
GCNT3-204ENST00000559200 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
GCNT3-204ENST00000559200 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
GCNT3-204ENST00000559200 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
GCNT3-204ENST00000559200 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
GCNT3-204ENST00000559200 ADAMTS12P58397 1594 aa16.77■□□□□ 0.28
GCNT3-204ENST00000559200 CUL7Q14999 1698 aa16.74■□□□□ 0.27
GCNT3-204ENST00000559200 CHD1O14646 1710 aa16.73■□□□□ 0.27
GCNT3-204ENST00000559200 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
GCNT3-204ENST00000559200 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
GCNT3-204ENST00000559200 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
GCNT3-204ENST00000559200 EEA1Q15075 1411 aa16.69■□□□□ 0.26
GCNT3-204ENST00000559200 IGF1RP08069 1367 aa16.67■□□□□ 0.26
GCNT3-204ENST00000559200 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
GCNT3-204ENST00000559200 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
GCNT3-204ENST00000559200 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
GCNT3-204ENST00000559200 FBLN2P98095 1184 aa16.6■□□□□ 0.25
GCNT3-204ENST00000559200 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
GCNT3-204ENST00000559200 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
GCNT3-204ENST00000559200 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
GCNT3-204ENST00000559200 RAPGEF2Q9Y4G8 1499 aa16.56■□□□□ 0.24
GCNT3-204ENST00000559200 NUP160Q12769 1436 aa16.56■□□□□ 0.24
GCNT3-204ENST00000559200 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
GCNT3-204ENST00000559200 KIF21BO75037 1637 aa16.53■□□□□ 0.24
GCNT3-204ENST00000559200 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
GCNT3-204ENST00000559200 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
GCNT3-204ENST00000559200 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms