RNA–Protein interactions for RNA: ENST00000559143.1

MFGE8-209, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 3

Gene MFGE8, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-209ENST00000559143 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
MFGE8-209ENST00000559143 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
MFGE8-209ENST00000559143 ABCC9O60706 1549 aa19.2■□□□□ 0.66
MFGE8-209ENST00000559143 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
MFGE8-209ENST00000559143 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
MFGE8-209ENST00000559143 NACADO15069 1562 aa18.66■□□□□ 0.58
MFGE8-209ENST00000559143 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
MFGE8-209ENST00000559143 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
MFGE8-209ENST00000559143 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
MFGE8-209ENST00000559143 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
MFGE8-209ENST00000559143 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
MFGE8-209ENST00000559143 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
MFGE8-209ENST00000559143 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
MFGE8-209ENST00000559143 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
MFGE8-209ENST00000559143 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
MFGE8-209ENST00000559143 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
MFGE8-209ENST00000559143 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
MFGE8-209ENST00000559143 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
MFGE8-209ENST00000559143 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
MFGE8-209ENST00000559143 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
MFGE8-209ENST00000559143 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
MFGE8-209ENST00000559143 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
MFGE8-209ENST00000559143 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
MFGE8-209ENST00000559143 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
MFGE8-209ENST00000559143 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
MFGE8-209ENST00000559143 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
MFGE8-209ENST00000559143 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
MFGE8-209ENST00000559143 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
MFGE8-209ENST00000559143 WIZO95785 1651 aa16.97■□□□□ 0.31
MFGE8-209ENST00000559143 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
MFGE8-209ENST00000559143 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
MFGE8-209ENST00000559143 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
MFGE8-209ENST00000559143 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
MFGE8-209ENST00000559143 CFTRP13569 1480 aa16.64■□□□□ 0.25
MFGE8-209ENST00000559143 NESP48681 1621 aa16.63■□□□□ 0.25
MFGE8-209ENST00000559143 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
MFGE8-209ENST00000559143 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
MFGE8-209ENST00000559143 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
MFGE8-209ENST00000559143 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
MFGE8-209ENST00000559143 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
MFGE8-209ENST00000559143 CUX2O14529 1486 aa16.45■□□□□ 0.22
MFGE8-209ENST00000559143 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
MFGE8-209ENST00000559143 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
MFGE8-209ENST00000559143 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
MFGE8-209ENST00000559143 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
MFGE8-209ENST00000559143 WDR62O43379 1518 aa16.37■□□□□ 0.21
MFGE8-209ENST00000559143 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
MFGE8-209ENST00000559143 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
MFGE8-209ENST00000559143 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
MFGE8-209ENST00000559143 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
MFGE8-209ENST00000559143 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
MFGE8-209ENST00000559143 CUX1P39880 1505 aa16.13■□□□□ 0.17
MFGE8-209ENST00000559143 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MFGE8-209ENST00000559143 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
MFGE8-209ENST00000559143 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
MFGE8-209ENST00000559143 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
MFGE8-209ENST00000559143 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
MFGE8-209ENST00000559143 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
MFGE8-209ENST00000559143 WDR97A6NE52 1622 aa16.02■□□□□ 0.16
MFGE8-209ENST00000559143 SOGA1O94964 1423 aa16.02■□□□□ 0.15
MFGE8-209ENST00000559143 SYNJ1O43426 1573 aa16■□□□□ 0.15
MFGE8-209ENST00000559143 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
MFGE8-209ENST00000559143 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
MFGE8-209ENST00000559143 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
MFGE8-209ENST00000559143 EIF4G3O43432 1585 aaKnown RBP15.93■□□□□ 0.14
MFGE8-209ENST00000559143 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.133e-8■■■■□ 21.1
MFGE8-209ENST00000559143 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
MFGE8-209ENST00000559143 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
MFGE8-209ENST00000559143 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
MFGE8-209ENST00000559143 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
MFGE8-209ENST00000559143 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
MFGE8-209ENST00000559143 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
MFGE8-209ENST00000559143 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
MFGE8-209ENST00000559143 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
MFGE8-209ENST00000559143 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
MFGE8-209ENST00000559143 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
MFGE8-209ENST00000559143 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
MFGE8-209ENST00000559143 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
MFGE8-209ENST00000559143 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
MFGE8-209ENST00000559143 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
MFGE8-209ENST00000559143 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
MFGE8-209ENST00000559143 IGF1RP08069 1367 aa15.67■□□□□ 0.1
MFGE8-209ENST00000559143 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
MFGE8-209ENST00000559143 CHD1O14646 1710 aa15.65■□□□□ 0.1
MFGE8-209ENST00000559143 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
MFGE8-209ENST00000559143 CUL7Q14999 1698 aa15.63■□□□□ 0.09
MFGE8-209ENST00000559143 FBLN2P98095 1184 aa15.62■□□□□ 0.09
MFGE8-209ENST00000559143 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
MFGE8-209ENST00000559143 NUP160Q12769 1436 aa15.6■□□□□ 0.09
MFGE8-209ENST00000559143 EEA1Q15075 1411 aa15.6■□□□□ 0.09
MFGE8-209ENST00000559143 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
MFGE8-209ENST00000559143 CARMIL1Q5VZK9 1371 aa15.57■□□□□ 0.08
MFGE8-209ENST00000559143 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
MFGE8-209ENST00000559143 CEP170Q5SW79 1584 aa15.52■□□□□ 0.07
MFGE8-209ENST00000559143 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
MFGE8-209ENST00000559143 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
MFGE8-209ENST00000559143 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
MFGE8-209ENST00000559143 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
MFGE8-209ENST00000559143 KIAA0586Q9BVV6 1533 aa15.47■□□□□ 0.07
MFGE8-209ENST00000559143 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms