RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
HMG20A-208ENST00000559099 ABCC9O60706 1549 aa19.92■□□□□ 0.78
HMG20A-208ENST00000559099 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
HMG20A-208ENST00000559099 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.64
HMG20A-208ENST00000559099 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
HMG20A-208ENST00000559099 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
HMG20A-208ENST00000559099 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
HMG20A-208ENST00000559099 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
HMG20A-208ENST00000559099 NACADO15069 1562 aa18.17■□□□□ 0.5
HMG20A-208ENST00000559099 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
HMG20A-208ENST00000559099 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
HMG20A-208ENST00000559099 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
HMG20A-208ENST00000559099 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
HMG20A-208ENST00000559099 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
HMG20A-208ENST00000559099 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
HMG20A-208ENST00000559099 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
HMG20A-208ENST00000559099 CUX2O14529 1486 aa17.53■□□□□ 0.4
HMG20A-208ENST00000559099 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
HMG20A-208ENST00000559099 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
HMG20A-208ENST00000559099 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
HMG20A-208ENST00000559099 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
HMG20A-208ENST00000559099 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
HMG20A-208ENST00000559099 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
HMG20A-208ENST00000559099 NESP48681 1621 aa16.88■□□□□ 0.29
HMG20A-208ENST00000559099 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
HMG20A-208ENST00000559099 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
HMG20A-208ENST00000559099 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
HMG20A-208ENST00000559099 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
HMG20A-208ENST00000559099 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
HMG20A-208ENST00000559099 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
HMG20A-208ENST00000559099 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
HMG20A-208ENST00000559099 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
HMG20A-208ENST00000559099 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
HMG20A-208ENST00000559099 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
HMG20A-208ENST00000559099 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
HMG20A-208ENST00000559099 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
HMG20A-208ENST00000559099 WDR62O43379 1518 aa16.45■□□□□ 0.22
HMG20A-208ENST00000559099 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
HMG20A-208ENST00000559099 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
HMG20A-208ENST00000559099 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
HMG20A-208ENST00000559099 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
HMG20A-208ENST00000559099 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
HMG20A-208ENST00000559099 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
HMG20A-208ENST00000559099 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
HMG20A-208ENST00000559099 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
HMG20A-208ENST00000559099 CYB5RLQ6IPT4 315 aa16.2■□□□□ 0.18
HMG20A-208ENST00000559099 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
HMG20A-208ENST00000559099 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
HMG20A-208ENST00000559099 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
HMG20A-208ENST00000559099 ILDR1Q86SU0 546 aaPredicted RBP16.04■□□□□ 0.16
HMG20A-208ENST00000559099 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
HMG20A-208ENST00000559099 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
HMG20A-208ENST00000559099 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
HMG20A-208ENST00000559099 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
HMG20A-208ENST00000559099 CHD1O14646 1710 aa15.91■□□□□ 0.14
HMG20A-208ENST00000559099 CFTRP13569 1480 aa15.86■□□□□ 0.13
HMG20A-208ENST00000559099 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
HMG20A-208ENST00000559099 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
HMG20A-208ENST00000559099 WIZO95785 1651 aa15.74■□□□□ 0.11
HMG20A-208ENST00000559099 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
HMG20A-208ENST00000559099 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
HMG20A-208ENST00000559099 FBLN2P98095 1184 aa15.67■□□□□ 0.1
HMG20A-208ENST00000559099 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
HMG20A-208ENST00000559099 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
HMG20A-208ENST00000559099 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
HMG20A-208ENST00000559099 KDM4FA0A1W2PPD8 638 aa15.58■□□□□ 0.08
HMG20A-208ENST00000559099 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
HMG20A-208ENST00000559099 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
HMG20A-208ENST00000559099 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
HMG20A-208ENST00000559099 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
HMG20A-208ENST00000559099 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
HMG20A-208ENST00000559099 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
HMG20A-208ENST00000559099 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
HMG20A-208ENST00000559099 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
HMG20A-208ENST00000559099 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
HMG20A-208ENST00000559099 TDRD9Q8NDG6 1382 aaKnown RBP15.41■□□□□ 0.06
HMG20A-208ENST00000559099 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
HMG20A-208ENST00000559099 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
HMG20A-208ENST00000559099 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
HMG20A-208ENST00000559099 SYNJ2O15056 1496 aa15.37■□□□□ 0.05
HMG20A-208ENST00000559099 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
HMG20A-208ENST00000559099 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
HMG20A-208ENST00000559099 KDM6BO15054 1643 aa15.31■□□□□ 0.04
HMG20A-208ENST00000559099 SOGA1O94964 1423 aa15.3■□□□□ 0.04
HMG20A-208ENST00000559099 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
HMG20A-208ENST00000559099 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
HMG20A-208ENST00000559099 FBXO41Q8TF61 875 aa15.28■□□□□ 0.04
HMG20A-208ENST00000559099 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.03
HMG20A-208ENST00000559099 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
HMG20A-208ENST00000559099 ADGRL1O94910 1474 aa15.24■□□□□ 0.03
HMG20A-208ENST00000559099 DIP2BQ9P265 1576 aa15.24■□□□□ 0.03
HMG20A-208ENST00000559099 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
HMG20A-208ENST00000559099 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
HMG20A-208ENST00000559099 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
HMG20A-208ENST00000559099 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
HMG20A-208ENST00000559099 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
HMG20A-208ENST00000559099 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
HMG20A-208ENST00000559099 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
HMG20A-208ENST00000559099 NUP160Q12769 1436 aa15.12■□□□□ 0.01
HMG20A-208ENST00000559099 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms