RNA–Protein interactions for RNA: ENST00000559083.1

KNSTRN-205, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 405 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-205ENST00000559083 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
KNSTRN-205ENST00000559083 CCDC180Q9P1Z9 1646 aa20.77■□□□□ 0.92
KNSTRN-205ENST00000559083 ABCC9O60706 1549 aa19.92■□□□□ 0.78
KNSTRN-205ENST00000559083 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
KNSTRN-205ENST00000559083 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
KNSTRN-205ENST00000559083 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
KNSTRN-205ENST00000559083 NACADO15069 1562 aa19.48■□□□□ 0.71
KNSTRN-205ENST00000559083 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
KNSTRN-205ENST00000559083 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
KNSTRN-205ENST00000559083 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
KNSTRN-205ENST00000559083 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
KNSTRN-205ENST00000559083 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
KNSTRN-205ENST00000559083 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
KNSTRN-205ENST00000559083 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
KNSTRN-205ENST00000559083 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
KNSTRN-205ENST00000559083 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
KNSTRN-205ENST00000559083 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
KNSTRN-205ENST00000559083 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
KNSTRN-205ENST00000559083 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
KNSTRN-205ENST00000559083 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
KNSTRN-205ENST00000559083 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
KNSTRN-205ENST00000559083 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
KNSTRN-205ENST00000559083 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
KNSTRN-205ENST00000559083 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
KNSTRN-205ENST00000559083 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
KNSTRN-205ENST00000559083 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
KNSTRN-205ENST00000559083 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
KNSTRN-205ENST00000559083 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
KNSTRN-205ENST00000559083 WIZO95785 1651 aa17.81■□□□□ 0.44
KNSTRN-205ENST00000559083 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
KNSTRN-205ENST00000559083 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
KNSTRN-205ENST00000559083 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
KNSTRN-205ENST00000559083 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
KNSTRN-205ENST00000559083 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
KNSTRN-205ENST00000559083 CFTRP13569 1480 aa17.39■□□□□ 0.37
KNSTRN-205ENST00000559083 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
KNSTRN-205ENST00000559083 NESP48681 1621 aa17.3■□□□□ 0.36
KNSTRN-205ENST00000559083 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
KNSTRN-205ENST00000559083 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
KNSTRN-205ENST00000559083 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
KNSTRN-205ENST00000559083 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
KNSTRN-205ENST00000559083 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
KNSTRN-205ENST00000559083 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
KNSTRN-205ENST00000559083 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
KNSTRN-205ENST00000559083 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
KNSTRN-205ENST00000559083 WDR62O43379 1518 aa17.02■□□□□ 0.32
KNSTRN-205ENST00000559083 CUX2O14529 1486 aa16.99■□□□□ 0.31
KNSTRN-205ENST00000559083 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
KNSTRN-205ENST00000559083 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
KNSTRN-205ENST00000559083 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
KNSTRN-205ENST00000559083 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
KNSTRN-205ENST00000559083 CUX1P39880 1505 aa16.9■□□□□ 0.3
KNSTRN-205ENST00000559083 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
KNSTRN-205ENST00000559083 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
KNSTRN-205ENST00000559083 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
KNSTRN-205ENST00000559083 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
KNSTRN-205ENST00000559083 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
KNSTRN-205ENST00000559083 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
KNSTRN-205ENST00000559083 SOGA1O94964 1423 aa16.78■□□□□ 0.28
KNSTRN-205ENST00000559083 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
KNSTRN-205ENST00000559083 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
KNSTRN-205ENST00000559083 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
KNSTRN-205ENST00000559083 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
KNSTRN-205ENST00000559083 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
KNSTRN-205ENST00000559083 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
KNSTRN-205ENST00000559083 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
KNSTRN-205ENST00000559083 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
KNSTRN-205ENST00000559083 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
KNSTRN-205ENST00000559083 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
KNSTRN-205ENST00000559083 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
KNSTRN-205ENST00000559083 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
KNSTRN-205ENST00000559083 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.246e-7■■■■□ 20.4
KNSTRN-205ENST00000559083 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
KNSTRN-205ENST00000559083 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
KNSTRN-205ENST00000559083 EEA1Q15075 1411 aa16.53■□□□□ 0.24
KNSTRN-205ENST00000559083 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.23
KNSTRN-205ENST00000559083 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
KNSTRN-205ENST00000559083 IGF1RP08069 1367 aa16.45■□□□□ 0.22
KNSTRN-205ENST00000559083 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
KNSTRN-205ENST00000559083 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
KNSTRN-205ENST00000559083 CUL7Q14999 1698 aa16.43■□□□□ 0.22
KNSTRN-205ENST00000559083 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
KNSTRN-205ENST00000559083 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
KNSTRN-205ENST00000559083 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
KNSTRN-205ENST00000559083 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
KNSTRN-205ENST00000559083 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
KNSTRN-205ENST00000559083 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
KNSTRN-205ENST00000559083 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
KNSTRN-205ENST00000559083 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
KNSTRN-205ENST00000559083 FBLN2P98095 1184 aa16.32■□□□□ 0.2
KNSTRN-205ENST00000559083 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
KNSTRN-205ENST00000559083 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
KNSTRN-205ENST00000559083 CHD1O14646 1710 aa16.3■□□□□ 0.2
KNSTRN-205ENST00000559083 NUP160Q12769 1436 aa16.27■□□□□ 0.19
KNSTRN-205ENST00000559083 KIF21BO75037 1637 aa16.27■□□□□ 0.19
KNSTRN-205ENST00000559083 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
KNSTRN-205ENST00000559083 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
KNSTRN-205ENST00000559083 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
KNSTRN-205ENST00000559083 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
KNSTRN-205ENST00000559083 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms