RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
PCAT29-202ENST00000558941 ABCC9O60706 1549 aa20.26■□□□□ 0.83
PCAT29-202ENST00000558941 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
PCAT29-202ENST00000558941 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
PCAT29-202ENST00000558941 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
PCAT29-202ENST00000558941 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
PCAT29-202ENST00000558941 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCAT29-202ENST00000558941 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
PCAT29-202ENST00000558941 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
PCAT29-202ENST00000558941 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
PCAT29-202ENST00000558941 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
PCAT29-202ENST00000558941 NACADO15069 1562 aa18.24■□□□□ 0.51
PCAT29-202ENST00000558941 CUX2O14529 1486 aa17.94■□□□□ 0.46
PCAT29-202ENST00000558941 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
PCAT29-202ENST00000558941 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
PCAT29-202ENST00000558941 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
PCAT29-202ENST00000558941 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
PCAT29-202ENST00000558941 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
PCAT29-202ENST00000558941 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
PCAT29-202ENST00000558941 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
PCAT29-202ENST00000558941 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
PCAT29-202ENST00000558941 NESP48681 1621 aa17.11■□□□□ 0.33
PCAT29-202ENST00000558941 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
PCAT29-202ENST00000558941 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
PCAT29-202ENST00000558941 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
PCAT29-202ENST00000558941 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
PCAT29-202ENST00000558941 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
PCAT29-202ENST00000558941 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
PCAT29-202ENST00000558941 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
PCAT29-202ENST00000558941 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
PCAT29-202ENST00000558941 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
PCAT29-202ENST00000558941 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
PCAT29-202ENST00000558941 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
PCAT29-202ENST00000558941 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
PCAT29-202ENST00000558941 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
PCAT29-202ENST00000558941 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
PCAT29-202ENST00000558941 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
PCAT29-202ENST00000558941 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
PCAT29-202ENST00000558941 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
PCAT29-202ENST00000558941 WDR62O43379 1518 aa16.64■□□□□ 0.25
PCAT29-202ENST00000558941 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
PCAT29-202ENST00000558941 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
PCAT29-202ENST00000558941 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
PCAT29-202ENST00000558941 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
PCAT29-202ENST00000558941 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
PCAT29-202ENST00000558941 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
PCAT29-202ENST00000558941 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
PCAT29-202ENST00000558941 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
PCAT29-202ENST00000558941 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
PCAT29-202ENST00000558941 ZNF608Q9ULD9 1512 aaPredicted RBP16.16■□□□□ 0.18
PCAT29-202ENST00000558941 CHD1O14646 1710 aa16.16■□□□□ 0.18
PCAT29-202ENST00000558941 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
PCAT29-202ENST00000558941 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
PCAT29-202ENST00000558941 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
PCAT29-202ENST00000558941 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
PCAT29-202ENST00000558941 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
PCAT29-202ENST00000558941 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PCAT29-202ENST00000558941 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
PCAT29-202ENST00000558941 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
PCAT29-202ENST00000558941 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
PCAT29-202ENST00000558941 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
PCAT29-202ENST00000558941 CFTRP13569 1480 aa15.85■□□□□ 0.13
PCAT29-202ENST00000558941 HECW2Q9P2P5 1572 aa15.84■□□□□ 0.13
PCAT29-202ENST00000558941 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
PCAT29-202ENST00000558941 FBXO41Q8TF61 875 aa15.79■□□□□ 0.12
PCAT29-202ENST00000558941 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCAT29-202ENST00000558941 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
PCAT29-202ENST00000558941 FBLN2P98095 1184 aa15.74■□□□□ 0.11
PCAT29-202ENST00000558941 TARBP1Q13395 1621 aaKnown RBP15.74■□□□□ 0.11
PCAT29-202ENST00000558941 ILDR2Q71H61 639 aa15.73■□□□□ 0.11
PCAT29-202ENST00000558941 SOCS7O14512 581 aa15.72■□□□□ 0.11
PCAT29-202ENST00000558941 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
PCAT29-202ENST00000558941 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
PCAT29-202ENST00000558941 WIZO95785 1651 aa15.67■□□□□ 0.1
PCAT29-202ENST00000558941 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
PCAT29-202ENST00000558941 KDM6BO15054 1643 aa15.61■□□□□ 0.09
PCAT29-202ENST00000558941 ADGRL1O94910 1474 aa15.59■□□□□ 0.09
PCAT29-202ENST00000558941 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
PCAT29-202ENST00000558941 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
PCAT29-202ENST00000558941 DNMBPQ6XZF7 1577 aa15.52■□□□□ 0.07
PCAT29-202ENST00000558941 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
PCAT29-202ENST00000558941 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
PCAT29-202ENST00000558941 POLA1P09884 1462 aaPredicted RBP15.46■□□□□ 0.07
PCAT29-202ENST00000558941 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
PCAT29-202ENST00000558941 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
PCAT29-202ENST00000558941 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
PCAT29-202ENST00000558941 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
PCAT29-202ENST00000558941 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
PCAT29-202ENST00000558941 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
PCAT29-202ENST00000558941 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
PCAT29-202ENST00000558941 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
PCAT29-202ENST00000558941 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
PCAT29-202ENST00000558941 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
PCAT29-202ENST00000558941 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
PCAT29-202ENST00000558941 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
PCAT29-202ENST00000558941 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
PCAT29-202ENST00000558941 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
PCAT29-202ENST00000558941 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
PCAT29-202ENST00000558941 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
PCAT29-202ENST00000558941 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms