RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
NEO1-205ENST00000558886 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
NEO1-205ENST00000558886 ABCC9O60706 1549 aa21.32■■□□□ 1
NEO1-205ENST00000558886 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
NEO1-205ENST00000558886 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
NEO1-205ENST00000558886 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
NEO1-205ENST00000558886 NACADO15069 1562 aa20.3■□□□□ 0.84
NEO1-205ENST00000558886 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
NEO1-205ENST00000558886 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
NEO1-205ENST00000558886 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
NEO1-205ENST00000558886 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
NEO1-205ENST00000558886 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
NEO1-205ENST00000558886 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
NEO1-205ENST00000558886 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
NEO1-205ENST00000558886 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
NEO1-205ENST00000558886 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
NEO1-205ENST00000558886 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
NEO1-205ENST00000558886 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
NEO1-205ENST00000558886 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
NEO1-205ENST00000558886 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
NEO1-205ENST00000558886 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
NEO1-205ENST00000558886 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
NEO1-205ENST00000558886 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
NEO1-205ENST00000558886 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
NEO1-205ENST00000558886 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
NEO1-205ENST00000558886 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
NEO1-205ENST00000558886 PEG3Q9GZU2 1588 aa18.71■□□□□ 0.59
NEO1-205ENST00000558886 WIZO95785 1651 aa18.7■□□□□ 0.58
NEO1-205ENST00000558886 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
NEO1-205ENST00000558886 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
NEO1-205ENST00000558886 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
NEO1-205ENST00000558886 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
NEO1-205ENST00000558886 NESP48681 1621 aa18.37■□□□□ 0.53
NEO1-205ENST00000558886 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
NEO1-205ENST00000558886 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
NEO1-205ENST00000558886 CUX2O14529 1486 aa18.25■□□□□ 0.51
NEO1-205ENST00000558886 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
NEO1-205ENST00000558886 CFTRP13569 1480 aa18.15■□□□□ 0.5
NEO1-205ENST00000558886 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
NEO1-205ENST00000558886 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
NEO1-205ENST00000558886 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
NEO1-205ENST00000558886 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
NEO1-205ENST00000558886 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
NEO1-205ENST00000558886 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
NEO1-205ENST00000558886 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
NEO1-205ENST00000558886 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
NEO1-205ENST00000558886 WDR62O43379 1518 aa17.9■□□□□ 0.46
NEO1-205ENST00000558886 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
NEO1-205ENST00000558886 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
NEO1-205ENST00000558886 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
NEO1-205ENST00000558886 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
NEO1-205ENST00000558886 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
NEO1-205ENST00000558886 CUX1P39880 1505 aa17.7■□□□□ 0.42
NEO1-205ENST00000558886 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
NEO1-205ENST00000558886 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
NEO1-205ENST00000558886 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
NEO1-205ENST00000558886 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
NEO1-205ENST00000558886 SOGA1O94964 1423 aa17.62■□□□□ 0.41
NEO1-205ENST00000558886 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
NEO1-205ENST00000558886 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NEO1-205ENST00000558886 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
NEO1-205ENST00000558886 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
NEO1-205ENST00000558886 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
NEO1-205ENST00000558886 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
NEO1-205ENST00000558886 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
NEO1-205ENST00000558886 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
NEO1-205ENST00000558886 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
NEO1-205ENST00000558886 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
NEO1-205ENST00000558886 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
NEO1-205ENST00000558886 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEO1-205ENST00000558886 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
NEO1-205ENST00000558886 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
NEO1-205ENST00000558886 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
NEO1-205ENST00000558886 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
NEO1-205ENST00000558886 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
NEO1-205ENST00000558886 FBLN2P98095 1184 aa17.33■□□□□ 0.36
NEO1-205ENST00000558886 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
NEO1-205ENST00000558886 ABCA5Q8WWZ7 1642 aa17.31■□□□□ 0.36
NEO1-205ENST00000558886 CHD1O14646 1710 aa17.3■□□□□ 0.36
NEO1-205ENST00000558886 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
NEO1-205ENST00000558886 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
NEO1-205ENST00000558886 IGF1RP08069 1367 aa17.27■□□□□ 0.35
NEO1-205ENST00000558886 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
NEO1-205ENST00000558886 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
NEO1-205ENST00000558886 EEA1Q15075 1411 aa17.25■□□□□ 0.35
NEO1-205ENST00000558886 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
NEO1-205ENST00000558886 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
NEO1-205ENST00000558886 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
NEO1-205ENST00000558886 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
NEO1-205ENST00000558886 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
NEO1-205ENST00000558886 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
NEO1-205ENST00000558886 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
NEO1-205ENST00000558886 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
NEO1-205ENST00000558886 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
NEO1-205ENST00000558886 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
NEO1-205ENST00000558886 CUL7Q14999 1698 aa17.14■□□□□ 0.33
NEO1-205ENST00000558886 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
NEO1-205ENST00000558886 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
NEO1-205ENST00000558886 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
NEO1-205ENST00000558886 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms