RNA–Protein interactions for RNA: ENST00000558799.5

LRRC49-212, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-212ENST00000558799 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
LRRC49-212ENST00000558799 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
LRRC49-212ENST00000558799 ABCC9O60706 1549 aa20.25■□□□□ 0.83
LRRC49-212ENST00000558799 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
LRRC49-212ENST00000558799 NACADO15069 1562 aa19.57■□□□□ 0.72
LRRC49-212ENST00000558799 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
LRRC49-212ENST00000558799 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
LRRC49-212ENST00000558799 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
LRRC49-212ENST00000558799 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
LRRC49-212ENST00000558799 UNC13AQ9UPW8 1703 aa19.21■□□□□ 0.67
LRRC49-212ENST00000558799 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
LRRC49-212ENST00000558799 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
LRRC49-212ENST00000558799 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
LRRC49-212ENST00000558799 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
LRRC49-212ENST00000558799 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
LRRC49-212ENST00000558799 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
LRRC49-212ENST00000558799 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
LRRC49-212ENST00000558799 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
LRRC49-212ENST00000558799 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
LRRC49-212ENST00000558799 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
LRRC49-212ENST00000558799 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
LRRC49-212ENST00000558799 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
LRRC49-212ENST00000558799 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
LRRC49-212ENST00000558799 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
LRRC49-212ENST00000558799 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
LRRC49-212ENST00000558799 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
LRRC49-212ENST00000558799 WIZO95785 1651 aa17.97■□□□□ 0.47
LRRC49-212ENST00000558799 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
LRRC49-212ENST00000558799 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
LRRC49-212ENST00000558799 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.43
LRRC49-212ENST00000558799 NESP48681 1621 aa17.58■□□□□ 0.4
LRRC49-212ENST00000558799 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
LRRC49-212ENST00000558799 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
LRRC49-212ENST00000558799 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
LRRC49-212ENST00000558799 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
LRRC49-212ENST00000558799 CFTRP13569 1480 aa17.45■□□□□ 0.38
LRRC49-212ENST00000558799 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
LRRC49-212ENST00000558799 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
LRRC49-212ENST00000558799 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
LRRC49-212ENST00000558799 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
LRRC49-212ENST00000558799 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
LRRC49-212ENST00000558799 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
LRRC49-212ENST00000558799 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
LRRC49-212ENST00000558799 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
LRRC49-212ENST00000558799 CUX2O14529 1486 aa17.21■□□□□ 0.35
LRRC49-212ENST00000558799 WDR62O43379 1518 aa17.2■□□□□ 0.34
LRRC49-212ENST00000558799 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
LRRC49-212ENST00000558799 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
LRRC49-212ENST00000558799 TOPBP1Q92547 1522 aa17.07■□□□□ 0.32
LRRC49-212ENST00000558799 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
LRRC49-212ENST00000558799 CUX1P39880 1505 aa17.01■□□□□ 0.31
LRRC49-212ENST00000558799 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
LRRC49-212ENST00000558799 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
LRRC49-212ENST00000558799 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
LRRC49-212ENST00000558799 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
LRRC49-212ENST00000558799 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
LRRC49-212ENST00000558799 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
LRRC49-212ENST00000558799 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
LRRC49-212ENST00000558799 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
LRRC49-212ENST00000558799 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
LRRC49-212ENST00000558799 SOGA1O94964 1423 aa16.85■□□□□ 0.29
LRRC49-212ENST00000558799 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
LRRC49-212ENST00000558799 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
LRRC49-212ENST00000558799 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
LRRC49-212ENST00000558799 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
LRRC49-212ENST00000558799 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRRC49-212ENST00000558799 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
LRRC49-212ENST00000558799 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
LRRC49-212ENST00000558799 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
LRRC49-212ENST00000558799 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
LRRC49-212ENST00000558799 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
LRRC49-212ENST00000558799 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
LRRC49-212ENST00000558799 CHD1O14646 1710 aa16.59■□□□□ 0.25
LRRC49-212ENST00000558799 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
LRRC49-212ENST00000558799 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
LRRC49-212ENST00000558799 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
LRRC49-212ENST00000558799 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
LRRC49-212ENST00000558799 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
LRRC49-212ENST00000558799 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
LRRC49-212ENST00000558799 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
LRRC49-212ENST00000558799 FBLN2P98095 1184 aa16.48■□□□□ 0.23
LRRC49-212ENST00000558799 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
LRRC49-212ENST00000558799 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
LRRC49-212ENST00000558799 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
LRRC49-212ENST00000558799 CUL7Q14999 1698 aa16.47■□□□□ 0.23
LRRC49-212ENST00000558799 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
LRRC49-212ENST00000558799 IGF1RP08069 1367 aa16.47■□□□□ 0.23
LRRC49-212ENST00000558799 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
LRRC49-212ENST00000558799 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
LRRC49-212ENST00000558799 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
LRRC49-212ENST00000558799 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
LRRC49-212ENST00000558799 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
LRRC49-212ENST00000558799 NUP160Q12769 1436 aa16.36■□□□□ 0.21
LRRC49-212ENST00000558799 EEA1Q15075 1411 aa16.33■□□□□ 0.2
LRRC49-212ENST00000558799 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
LRRC49-212ENST00000558799 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
LRRC49-212ENST00000558799 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.2
LRRC49-212ENST00000558799 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.2
LRRC49-212ENST00000558799 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.2
LRRC49-212ENST00000558799 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms