RNA–Protein interactions for RNA: ENST00000558631.1

APH1B-204, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-204ENST00000558631 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
APH1B-204ENST00000558631 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
APH1B-204ENST00000558631 ABCC9O60706 1549 aa18.64■□□□□ 0.57
APH1B-204ENST00000558631 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
APH1B-204ENST00000558631 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
APH1B-204ENST00000558631 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
APH1B-204ENST00000558631 NACADO15069 1562 aa17.82■□□□□ 0.44
APH1B-204ENST00000558631 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
APH1B-204ENST00000558631 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
APH1B-204ENST00000558631 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
APH1B-204ENST00000558631 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
APH1B-204ENST00000558631 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
APH1B-204ENST00000558631 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
APH1B-204ENST00000558631 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
APH1B-204ENST00000558631 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
APH1B-204ENST00000558631 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
APH1B-204ENST00000558631 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
APH1B-204ENST00000558631 CECR2Q9BXF3 1484 aa16.76■□□□□ 0.27
APH1B-204ENST00000558631 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
APH1B-204ENST00000558631 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
APH1B-204ENST00000558631 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
APH1B-204ENST00000558631 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
APH1B-204ENST00000558631 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
APH1B-204ENST00000558631 WIZO95785 1651 aa16.47■□□□□ 0.23
APH1B-204ENST00000558631 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
APH1B-204ENST00000558631 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
APH1B-204ENST00000558631 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
APH1B-204ENST00000558631 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
APH1B-204ENST00000558631 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
APH1B-204ENST00000558631 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
APH1B-204ENST00000558631 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
APH1B-204ENST00000558631 NESP48681 1621 aa16.16■□□□□ 0.18
APH1B-204ENST00000558631 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
APH1B-204ENST00000558631 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
APH1B-204ENST00000558631 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
APH1B-204ENST00000558631 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
APH1B-204ENST00000558631 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
APH1B-204ENST00000558631 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
APH1B-204ENST00000558631 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
APH1B-204ENST00000558631 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
APH1B-204ENST00000558631 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
APH1B-204ENST00000558631 CFTRP13569 1480 aa15.89■□□□□ 0.13
APH1B-204ENST00000558631 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
APH1B-204ENST00000558631 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
APH1B-204ENST00000558631 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
APH1B-204ENST00000558631 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
APH1B-204ENST00000558631 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
APH1B-204ENST00000558631 CUX2O14529 1486 aa15.71■□□□□ 0.1
APH1B-204ENST00000558631 WDR62O43379 1518 aa15.7■□□□□ 0.1
APH1B-204ENST00000558631 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
APH1B-204ENST00000558631 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
APH1B-204ENST00000558631 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
APH1B-204ENST00000558631 CUX1P39880 1505 aa15.57■□□□□ 0.08
APH1B-204ENST00000558631 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
APH1B-204ENST00000558631 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
APH1B-204ENST00000558631 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
APH1B-204ENST00000558631 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
APH1B-204ENST00000558631 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
APH1B-204ENST00000558631 ZNF608Q9ULD9 1512 aaPredicted RBP15.46■□□□□ 0.07
APH1B-204ENST00000558631 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
APH1B-204ENST00000558631 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
APH1B-204ENST00000558631 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
APH1B-204ENST00000558631 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
APH1B-204ENST00000558631 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
APH1B-204ENST00000558631 SOGA1O94964 1423 aa15.41■□□□□ 0.06
APH1B-204ENST00000558631 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
APH1B-204ENST00000558631 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
APH1B-204ENST00000558631 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
APH1B-204ENST00000558631 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
APH1B-204ENST00000558631 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.04
APH1B-204ENST00000558631 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
APH1B-204ENST00000558631 CHD1O14646 1710 aa15.25■□□□□ 0.03
APH1B-204ENST00000558631 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
APH1B-204ENST00000558631 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
APH1B-204ENST00000558631 FBLN2P98095 1184 aa15.22■□□□□ 0.03
APH1B-204ENST00000558631 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
APH1B-204ENST00000558631 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
APH1B-204ENST00000558631 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
APH1B-204ENST00000558631 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
APH1B-204ENST00000558631 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
APH1B-204ENST00000558631 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
APH1B-204ENST00000558631 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
APH1B-204ENST00000558631 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
APH1B-204ENST00000558631 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
APH1B-204ENST00000558631 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
APH1B-204ENST00000558631 OSCARQ8IYS5 282 aa15.08■□□□□ 0
APH1B-204ENST00000558631 CUL7Q14999 1698 aa15.03■□□□□ -0
APH1B-204ENST00000558631 GRIN2AQ12879 1464 aa15.03■□□□□ -0
APH1B-204ENST00000558631 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
APH1B-204ENST00000558631 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
APH1B-204ENST00000558631 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
APH1B-204ENST00000558631 IGF1RP08069 1367 aa15□□□□□ -0.01
APH1B-204ENST00000558631 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
APH1B-204ENST00000558631 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
APH1B-204ENST00000558631 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
APH1B-204ENST00000558631 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
APH1B-204ENST00000558631 CARMIL1Q5VZK9 1371 aa14.95□□□□□ -0.02
APH1B-204ENST00000558631 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
APH1B-204ENST00000558631 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
APH1B-204ENST00000558631 NUP160Q12769 1436 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms