RNA–Protein interactions for RNA: ENST00000558225.1

KLF13-203, Transcript of Kruppel like factor 13, humanhuman

TSL 3

Gene KLF13, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF13-203ENST00000558225 NISCHQ9Y2I1 1504 aa18.01■□□□□ 0.47
KLF13-203ENST00000558225 ABCC9O60706 1549 aa16.6■□□□□ 0.25
KLF13-203ENST00000558225 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
KLF13-203ENST00000558225 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
KLF13-203ENST00000558225 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
KLF13-203ENST00000558225 NACADO15069 1562 aa15.48■□□□□ 0.07
KLF13-203ENST00000558225 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
KLF13-203ENST00000558225 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
KLF13-203ENST00000558225 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
KLF13-203ENST00000558225 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
KLF13-203ENST00000558225 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
KLF13-203ENST00000558225 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
KLF13-203ENST00000558225 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
KLF13-203ENST00000558225 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
KLF13-203ENST00000558225 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
KLF13-203ENST00000558225 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
KLF13-203ENST00000558225 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
KLF13-203ENST00000558225 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
KLF13-203ENST00000558225 DNAJC5Q9H3Z4 198 aa14.8□□□□□ -0.04
KLF13-203ENST00000558225 CUX2O14529 1486 aa14.44□□□□□ -0.1
KLF13-203ENST00000558225 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
KLF13-203ENST00000558225 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
KLF13-203ENST00000558225 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
KLF13-203ENST00000558225 NESP48681 1621 aa14.17□□□□□ -0.14
KLF13-203ENST00000558225 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
KLF13-203ENST00000558225 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
KLF13-203ENST00000558225 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
KLF13-203ENST00000558225 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
KLF13-203ENST00000558225 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
KLF13-203ENST00000558225 LAMC3Q9Y6N6 1575 aa14.01□□□□□ -0.17
KLF13-203ENST00000558225 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
KLF13-203ENST00000558225 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
KLF13-203ENST00000558225 PEG3Q9GZU2 1588 aa13.98□□□□□ -0.17
KLF13-203ENST00000558225 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
KLF13-203ENST00000558225 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
KLF13-203ENST00000558225 MROH2BQ7Z745 1585 aa13.87□□□□□ -0.19
KLF13-203ENST00000558225 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
KLF13-203ENST00000558225 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
KLF13-203ENST00000558225 WDR62O43379 1518 aa13.84□□□□□ -0.19
KLF13-203ENST00000558225 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
KLF13-203ENST00000558225 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
KLF13-203ENST00000558225 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
KLF13-203ENST00000558225 WIZO95785 1651 aa13.67□□□□□ -0.22
KLF13-203ENST00000558225 CFTRP13569 1480 aa13.63□□□□□ -0.23
KLF13-203ENST00000558225 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
KLF13-203ENST00000558225 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
KLF13-203ENST00000558225 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
KLF13-203ENST00000558225 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
KLF13-203ENST00000558225 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
KLF13-203ENST00000558225 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
KLF13-203ENST00000558225 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
KLF13-203ENST00000558225 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
KLF13-203ENST00000558225 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
KLF13-203ENST00000558225 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
KLF13-203ENST00000558225 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
KLF13-203ENST00000558225 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
KLF13-203ENST00000558225 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
KLF13-203ENST00000558225 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
KLF13-203ENST00000558225 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
KLF13-203ENST00000558225 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
KLF13-203ENST00000558225 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
KLF13-203ENST00000558225 AQRO60306 1485 aaKnown RBP eCLIP13.33□□□□□ -0.28
KLF13-203ENST00000558225 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
KLF13-203ENST00000558225 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
KLF13-203ENST00000558225 CHD1O14646 1710 aa13.31□□□□□ -0.28
KLF13-203ENST00000558225 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
KLF13-203ENST00000558225 FBLN2P98095 1184 aa13.29□□□□□ -0.28
KLF13-203ENST00000558225 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
KLF13-203ENST00000558225 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
KLF13-203ENST00000558225 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
KLF13-203ENST00000558225 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
KLF13-203ENST00000558225 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
KLF13-203ENST00000558225 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
KLF13-203ENST00000558225 SOGA1O94964 1423 aa13.17□□□□□ -0.3
KLF13-203ENST00000558225 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
KLF13-203ENST00000558225 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
KLF13-203ENST00000558225 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
KLF13-203ENST00000558225 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
KLF13-203ENST00000558225 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
KLF13-203ENST00000558225 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
KLF13-203ENST00000558225 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
KLF13-203ENST00000558225 GAPVD1Q14C86 1478 aa13.08□□□□□ -0.32
KLF13-203ENST00000558225 CUX1P39880 1505 aa13.06□□□□□ -0.32
KLF13-203ENST00000558225 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
KLF13-203ENST00000558225 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
KLF13-203ENST00000558225 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
KLF13-203ENST00000558225 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
KLF13-203ENST00000558225 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
KLF13-203ENST00000558225 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
KLF13-203ENST00000558225 NUP160Q12769 1436 aa12.91□□□□□ -0.34
KLF13-203ENST00000558225 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
KLF13-203ENST00000558225 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
KLF13-203ENST00000558225 KIF13AQ9H1H9 1805 aa12.84□□□□□ -0.35
KLF13-203ENST00000558225 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
KLF13-203ENST00000558225 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
KLF13-203ENST00000558225 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
KLF13-203ENST00000558225 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
KLF13-203ENST00000558225 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
KLF13-203ENST00000558225 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
KLF13-203ENST00000558225 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms