RNA–Protein interactions for RNA: ENST00000557974.5

MRPS11-203, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 4

Gene MRPS11, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-203ENST00000557974 NISCHQ9Y2I1 1504 aa36.17■■■■□ 3.38
MRPS11-203ENST00000557974 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
MRPS11-203ENST00000557974 ABCC9O60706 1549 aa31.65■■■□□ 2.66
MRPS11-203ENST00000557974 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
MRPS11-203ENST00000557974 RB1CC1Q8TDY2 1594 aa30.33■■■□□ 2.45
MRPS11-203ENST00000557974 NACADO15069 1562 aa30.26■■■□□ 2.43
MRPS11-203ENST00000557974 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
MRPS11-203ENST00000557974 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
MRPS11-203ENST00000557974 DCAF1Q9Y4B6 1507 aa29.85■■■□□ 2.37
MRPS11-203ENST00000557974 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.34
MRPS11-203ENST00000557974 PABPN1Q86U42 306 aaKnown RBP eCLIP29.6■■■□□ 2.33
MRPS11-203ENST00000557974 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
MRPS11-203ENST00000557974 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
MRPS11-203ENST00000557974 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
MRPS11-203ENST00000557974 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
MRPS11-203ENST00000557974 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
MRPS11-203ENST00000557974 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
MRPS11-203ENST00000557974 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
MRPS11-203ENST00000557974 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
MRPS11-203ENST00000557974 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
MRPS11-203ENST00000557974 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
MRPS11-203ENST00000557974 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
MRPS11-203ENST00000557974 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
MRPS11-203ENST00000557974 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
MRPS11-203ENST00000557974 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
MRPS11-203ENST00000557974 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
MRPS11-203ENST00000557974 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
MRPS11-203ENST00000557974 WIZO95785 1651 aa27.62■■■□□ 2.01
MRPS11-203ENST00000557974 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
MRPS11-203ENST00000557974 NESP48681 1621 aa27.35■■□□□ 1.97
MRPS11-203ENST00000557974 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
MRPS11-203ENST00000557974 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
MRPS11-203ENST00000557974 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
MRPS11-203ENST00000557974 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.94
MRPS11-203ENST00000557974 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
MRPS11-203ENST00000557974 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
MRPS11-203ENST00000557974 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
MRPS11-203ENST00000557974 CUX2O14529 1486 aa26.94■■□□□ 1.9
MRPS11-203ENST00000557974 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
MRPS11-203ENST00000557974 CFTRP13569 1480 aa26.93■■□□□ 1.9
MRPS11-203ENST00000557974 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
MRPS11-203ENST00000557974 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
MRPS11-203ENST00000557974 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
MRPS11-203ENST00000557974 MRC2Q9UBG0 1479 aa26.79■■□□□ 1.88
MRPS11-203ENST00000557974 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
MRPS11-203ENST00000557974 WDR62O43379 1518 aa26.66■■□□□ 1.86
MRPS11-203ENST00000557974 URB2Q14146 1524 aaKnown RBP26.57■■□□□ 1.84
MRPS11-203ENST00000557974 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
MRPS11-203ENST00000557974 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
MRPS11-203ENST00000557974 DNMBPQ6XZF7 1577 aa26.35■■□□□ 1.81
MRPS11-203ENST00000557974 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
MRPS11-203ENST00000557974 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
MRPS11-203ENST00000557974 CUX1P39880 1505 aa26.18■■□□□ 1.78
MRPS11-203ENST00000557974 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
MRPS11-203ENST00000557974 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
MRPS11-203ENST00000557974 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
MRPS11-203ENST00000557974 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
MRPS11-203ENST00000557974 SOGA1O94964 1423 aa26.09■■□□□ 1.77
MRPS11-203ENST00000557974 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
MRPS11-203ENST00000557974 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
MRPS11-203ENST00000557974 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.76
MRPS11-203ENST00000557974 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
MRPS11-203ENST00000557974 TDRD9Q8NDG6 1382 aaKnown RBP25.97■■□□□ 1.75
MRPS11-203ENST00000557974 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
MRPS11-203ENST00000557974 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
MRPS11-203ENST00000557974 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
MRPS11-203ENST00000557974 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
MRPS11-203ENST00000557974 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
MRPS11-203ENST00000557974 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
MRPS11-203ENST00000557974 FBLN2P98095 1184 aa25.81■■□□□ 1.72
MRPS11-203ENST00000557974 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
MRPS11-203ENST00000557974 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
MRPS11-203ENST00000557974 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
MRPS11-203ENST00000557974 CHD1O14646 1710 aa25.74■■□□□ 1.71
MRPS11-203ENST00000557974 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
MRPS11-203ENST00000557974 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
MRPS11-203ENST00000557974 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
MRPS11-203ENST00000557974 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
MRPS11-203ENST00000557974 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
MRPS11-203ENST00000557974 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
MRPS11-203ENST00000557974 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
MRPS11-203ENST00000557974 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
MRPS11-203ENST00000557974 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
MRPS11-203ENST00000557974 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
MRPS11-203ENST00000557974 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
MRPS11-203ENST00000557974 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
MRPS11-203ENST00000557974 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
MRPS11-203ENST00000557974 GRIN2AQ12879 1464 aa25.43■■□□□ 1.66
MRPS11-203ENST00000557974 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
MRPS11-203ENST00000557974 CLASP1Q7Z460 1538 aa25.41■■□□□ 1.66
MRPS11-203ENST00000557974 IGF1RP08069 1367 aa25.35■■□□□ 1.65
MRPS11-203ENST00000557974 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
MRPS11-203ENST00000557974 NUP160Q12769 1436 aa25.3■■□□□ 1.64
MRPS11-203ENST00000557974 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
MRPS11-203ENST00000557974 CUL7Q14999 1698 aa25.26■■□□□ 1.63
MRPS11-203ENST00000557974 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
MRPS11-203ENST00000557974 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
MRPS11-203ENST00000557974 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
MRPS11-203ENST00000557974 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
MRPS11-203ENST00000557974 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms