RNA–Protein interactions for RNA: ENST00000557897.1

NTRK3-209, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 3

Gene NTRK3, Length 398 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-209ENST00000557897 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
NTRK3-209ENST00000557897 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
NTRK3-209ENST00000557897 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
NTRK3-209ENST00000557897 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
NTRK3-209ENST00000557897 ABCC9O60706 1549 aa12.45□□□□□ -0.42
NTRK3-209ENST00000557897 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
NTRK3-209ENST00000557897 MYO15BQ96JP2 1530 aa12.14□□□□□ -0.47
NTRK3-209ENST00000557897 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
NTRK3-209ENST00000557897 NACADO15069 1562 aa12.12□□□□□ -0.47
NTRK3-209ENST00000557897 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
NTRK3-209ENST00000557897 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
NTRK3-209ENST00000557897 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
NTRK3-209ENST00000557897 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
NTRK3-209ENST00000557897 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
NTRK3-209ENST00000557897 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
NTRK3-209ENST00000557897 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
NTRK3-209ENST00000557897 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
NTRK3-209ENST00000557897 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
NTRK3-209ENST00000557897 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
NTRK3-209ENST00000557897 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
NTRK3-209ENST00000557897 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
NTRK3-209ENST00000557897 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
NTRK3-209ENST00000557897 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
NTRK3-209ENST00000557897 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
NTRK3-209ENST00000557897 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.6
NTRK3-209ENST00000557897 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
NTRK3-209ENST00000557897 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
NTRK3-209ENST00000557897 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
NTRK3-209ENST00000557897 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
NTRK3-209ENST00000557897 FOXD1Q16676 465 aa11.21□□□□□ -0.61
NTRK3-209ENST00000557897 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
NTRK3-209ENST00000557897 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
NTRK3-209ENST00000557897 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
NTRK3-209ENST00000557897 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
NTRK3-209ENST00000557897 WIZO95785 1651 aa11.11□□□□□ -0.63
NTRK3-209ENST00000557897 TOP2AP11388 1531 aaKnown RBP11.08□□□□□ -0.64
NTRK3-209ENST00000557897 SUPT5HO00267 1087 aaKnown RBP10.96□□□□□ -0.65
NTRK3-209ENST00000557897 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
NTRK3-209ENST00000557897 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
NTRK3-209ENST00000557897 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
NTRK3-209ENST00000557897 CFTRP13569 1480 aa10.84□□□□□ -0.67
NTRK3-209ENST00000557897 DNAJC5Q9H3Z4 198 aa10.83□□□□□ -0.68
NTRK3-209ENST00000557897 NESP48681 1621 aa10.82□□□□□ -0.68
NTRK3-209ENST00000557897 MSH5O43196 834 aa10.8□□□□□ -0.68
NTRK3-209ENST00000557897 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
NTRK3-209ENST00000557897 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
NTRK3-209ENST00000557897 PRDM2Q13029 1718 aa10.73□□□□□ -0.69
NTRK3-209ENST00000557897 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
NTRK3-209ENST00000557897 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
NTRK3-209ENST00000557897 KIF21AQ7Z4S6 1674 aa10.69□□□□□ -0.7
NTRK3-209ENST00000557897 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
NTRK3-209ENST00000557897 MRC2Q9UBG0 1479 aa10.67□□□□□ -0.7
NTRK3-209ENST00000557897 WDR62O43379 1518 aa10.63□□□□□ -0.71
NTRK3-209ENST00000557897 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
NTRK3-209ENST00000557897 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
NTRK3-209ENST00000557897 CUX2O14529 1486 aa10.59□□□□□ -0.71
NTRK3-209ENST00000557897 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
NTRK3-209ENST00000557897 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
NTRK3-209ENST00000557897 CUX1P39880 1505 aa10.57□□□□□ -0.72
NTRK3-209ENST00000557897 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
NTRK3-209ENST00000557897 SYNJ1O43426 1573 aa10.52□□□□□ -0.72
NTRK3-209ENST00000557897 TOP2BQ02880 1626 aa10.52□□□□□ -0.73
NTRK3-209ENST00000557897 BIVM-ERCC5R4GMW8 1640 aa10.52□□□□□ -0.73
NTRK3-209ENST00000557897 POLA1P09884 1462 aaPredicted RBP10.51□□□□□ -0.73
NTRK3-209ENST00000557897 FGD5Q6ZNL6 1462 aa10.5□□□□□ -0.73
NTRK3-209ENST00000557897 IFT140Q96RY7 1462 aa10.48□□□□□ -0.73
NTRK3-209ENST00000557897 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
NTRK3-209ENST00000557897 SOGA1O94964 1423 aa10.43□□□□□ -0.74
NTRK3-209ENST00000557897 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
NTRK3-209ENST00000557897 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
NTRK3-209ENST00000557897 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
NTRK3-209ENST00000557897 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
NTRK3-209ENST00000557897 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
NTRK3-209ENST00000557897 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
NTRK3-209ENST00000557897 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
NTRK3-209ENST00000557897 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
NTRK3-209ENST00000557897 TDRD9Q8NDG6 1382 aaKnown RBP10.34□□□□□ -0.75
NTRK3-209ENST00000557897 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
NTRK3-209ENST00000557897 GAPVD1Q14C86 1478 aa10.33□□□□□ -0.76
NTRK3-209ENST00000557897 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
NTRK3-209ENST00000557897 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
NTRK3-209ENST00000557897 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
NTRK3-209ENST00000557897 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
NTRK3-209ENST00000557897 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
NTRK3-209ENST00000557897 MAGI1Q96QZ7 1491 aaPredicted RBP10.29□□□□□ -0.76
NTRK3-209ENST00000557897 ADAMTS12P58397 1594 aa10.27□□□□□ -0.76
NTRK3-209ENST00000557897 EEA1Q15075 1411 aa10.27□□□□□ -0.77
NTRK3-209ENST00000557897 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
NTRK3-209ENST00000557897 CUL7Q14999 1698 aa10.24□□□□□ -0.77
NTRK3-209ENST00000557897 IGF1RP08069 1367 aa10.24□□□□□ -0.77
NTRK3-209ENST00000557897 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
NTRK3-209ENST00000557897 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
NTRK3-209ENST00000557897 GRIN2AQ12879 1464 aa10.19□□□□□ -0.78
NTRK3-209ENST00000557897 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
NTRK3-209ENST00000557897 CARMIL1Q5VZK9 1371 aa10.18□□□□□ -0.78
NTRK3-209ENST00000557897 CHD1O14646 1710 aa10.17□□□□□ -0.78
NTRK3-209ENST00000557897 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
NTRK3-209ENST00000557897 NUP160Q12769 1436 aa10.16□□□□□ -0.78
NTRK3-209ENST00000557897 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
NTRK3-209ENST00000557897 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms