RNA–Protein interactions for RNA: ENST00000557847.1

AP001007.3-202, humanhuman

TSL 3

Gene AP001007.3, Length 334 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-202ENST00000557847 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
AP001007.3-202ENST00000557847 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
AP001007.3-202ENST00000557847 ABCC9O60706 1549 aa14.65□□□□□ -0.06
AP001007.3-202ENST00000557847 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
AP001007.3-202ENST00000557847 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
AP001007.3-202ENST00000557847 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
AP001007.3-202ENST00000557847 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
AP001007.3-202ENST00000557847 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
AP001007.3-202ENST00000557847 NACADO15069 1562 aa13.58□□□□□ -0.23
AP001007.3-202ENST00000557847 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
AP001007.3-202ENST00000557847 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
AP001007.3-202ENST00000557847 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
AP001007.3-202ENST00000557847 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
AP001007.3-202ENST00000557847 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
AP001007.3-202ENST00000557847 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
AP001007.3-202ENST00000557847 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
AP001007.3-202ENST00000557847 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
AP001007.3-202ENST00000557847 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
AP001007.3-202ENST00000557847 CUX2O14529 1486 aa12.97□□□□□ -0.33
AP001007.3-202ENST00000557847 DCAF1Q9Y4B6 1507 aa12.9□□□□□ -0.34
AP001007.3-202ENST00000557847 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
AP001007.3-202ENST00000557847 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
AP001007.3-202ENST00000557847 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
AP001007.3-202ENST00000557847 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
AP001007.3-202ENST00000557847 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
AP001007.3-202ENST00000557847 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
AP001007.3-202ENST00000557847 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
AP001007.3-202ENST00000557847 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
AP001007.3-202ENST00000557847 NESP48681 1621 aa12.42□□□□□ -0.42
AP001007.3-202ENST00000557847 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
AP001007.3-202ENST00000557847 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
AP001007.3-202ENST00000557847 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
AP001007.3-202ENST00000557847 LAMC3Q9Y6N6 1575 aa12.33□□□□□ -0.44
AP001007.3-202ENST00000557847 PDS5BQ9NTI5 1447 aa12.31□□□□□ -0.44
AP001007.3-202ENST00000557847 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
AP001007.3-202ENST00000557847 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.45
AP001007.3-202ENST00000557847 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
AP001007.3-202ENST00000557847 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
AP001007.3-202ENST00000557847 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
AP001007.3-202ENST00000557847 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
AP001007.3-202ENST00000557847 WDR62O43379 1518 aa12.18□□□□□ -0.46
AP001007.3-202ENST00000557847 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
AP001007.3-202ENST00000557847 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
AP001007.3-202ENST00000557847 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
AP001007.3-202ENST00000557847 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
AP001007.3-202ENST00000557847 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
AP001007.3-202ENST00000557847 ARHGEF11O15085 1522 aa12.02□□□□□ -0.48
AP001007.3-202ENST00000557847 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
AP001007.3-202ENST00000557847 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
AP001007.3-202ENST00000557847 CYB5RLQ6IPT4 315 aa11.99□□□□□ -0.49
AP001007.3-202ENST00000557847 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
AP001007.3-202ENST00000557847 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
AP001007.3-202ENST00000557847 CFTRP13569 1480 aa11.89□□□□□ -0.51
AP001007.3-202ENST00000557847 URB2Q14146 1524 aaKnown RBP11.87□□□□□ -0.51
AP001007.3-202ENST00000557847 FOXD1Q16676 465 aa11.87□□□□□ -0.51
AP001007.3-202ENST00000557847 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
AP001007.3-202ENST00000557847 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
AP001007.3-202ENST00000557847 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
AP001007.3-202ENST00000557847 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
AP001007.3-202ENST00000557847 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
AP001007.3-202ENST00000557847 ABCC8Q09428 1581 aa11.69□□□□□ -0.54
AP001007.3-202ENST00000557847 WIZO95785 1651 aa11.68□□□□□ -0.54
AP001007.3-202ENST00000557847 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
AP001007.3-202ENST00000557847 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
AP001007.3-202ENST00000557847 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
AP001007.3-202ENST00000557847 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
AP001007.3-202ENST00000557847 CHD1O14646 1710 aa11.63□□□□□ -0.55
AP001007.3-202ENST00000557847 FBLN2P98095 1184 aa11.63□□□□□ -0.55
AP001007.3-202ENST00000557847 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
AP001007.3-202ENST00000557847 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
AP001007.3-202ENST00000557847 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
AP001007.3-202ENST00000557847 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
AP001007.3-202ENST00000557847 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
AP001007.3-202ENST00000557847 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
AP001007.3-202ENST00000557847 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
AP001007.3-202ENST00000557847 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
AP001007.3-202ENST00000557847 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
AP001007.3-202ENST00000557847 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
AP001007.3-202ENST00000557847 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
AP001007.3-202ENST00000557847 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
AP001007.3-202ENST00000557847 KDM4FA0A1W2PPD8 638 aa11.48□□□□□ -0.57
AP001007.3-202ENST00000557847 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
AP001007.3-202ENST00000557847 SOGA1O94964 1423 aa11.47□□□□□ -0.57
AP001007.3-202ENST00000557847 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
AP001007.3-202ENST00000557847 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
AP001007.3-202ENST00000557847 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
AP001007.3-202ENST00000557847 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
AP001007.3-202ENST00000557847 KIF13AQ9H1H9 1805 aa11.35□□□□□ -0.59
AP001007.3-202ENST00000557847 ABCC10Q5T3U5 1492 aa11.34□□□□□ -0.59
AP001007.3-202ENST00000557847 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
AP001007.3-202ENST00000557847 FAM69CQ0P6D2 419 aa11.32□□□□□ -0.6
AP001007.3-202ENST00000557847 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
AP001007.3-202ENST00000557847 NUP160Q12769 1436 aa11.3□□□□□ -0.6
AP001007.3-202ENST00000557847 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
AP001007.3-202ENST00000557847 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
AP001007.3-202ENST00000557847 ADRA2BP18089 450 aa11.28□□□□□ -0.6
AP001007.3-202ENST00000557847 FBXO41Q8TF61 875 aa11.27□□□□□ -0.61
AP001007.3-202ENST00000557847 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
AP001007.3-202ENST00000557847 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
AP001007.3-202ENST00000557847 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms