RNA–Protein interactions for RNA: ENST00000557814.5

PKNOX2-208, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-208ENST00000557814 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
PKNOX2-208ENST00000557814 ABCC9O60706 1549 aa14.56□□□□□ -0.08
PKNOX2-208ENST00000557814 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
PKNOX2-208ENST00000557814 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
PKNOX2-208ENST00000557814 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
PKNOX2-208ENST00000557814 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
PKNOX2-208ENST00000557814 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
PKNOX2-208ENST00000557814 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
PKNOX2-208ENST00000557814 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
PKNOX2-208ENST00000557814 NACADO15069 1562 aa13.46□□□□□ -0.25
PKNOX2-208ENST00000557814 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
PKNOX2-208ENST00000557814 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
PKNOX2-208ENST00000557814 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
PKNOX2-208ENST00000557814 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
PKNOX2-208ENST00000557814 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
PKNOX2-208ENST00000557814 CC2D2AQ9P2K1 1620 aa13.07□□□□□ -0.32
PKNOX2-208ENST00000557814 SCRIBQ14160 1630 aa13□□□□□ -0.33
PKNOX2-208ENST00000557814 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
PKNOX2-208ENST00000557814 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
PKNOX2-208ENST00000557814 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
PKNOX2-208ENST00000557814 CUX2O14529 1486 aa12.78□□□□□ -0.36
PKNOX2-208ENST00000557814 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
PKNOX2-208ENST00000557814 SMARCA4P51532 1647 aa12.54□□□□□ -0.4
PKNOX2-208ENST00000557814 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
PKNOX2-208ENST00000557814 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
PKNOX2-208ENST00000557814 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
PKNOX2-208ENST00000557814 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
PKNOX2-208ENST00000557814 NCAPD3P42695 1498 aa12.46□□□□□ -0.42
PKNOX2-208ENST00000557814 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.42
PKNOX2-208ENST00000557814 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
PKNOX2-208ENST00000557814 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
PKNOX2-208ENST00000557814 WIZO95785 1651 aa12.32□□□□□ -0.44
PKNOX2-208ENST00000557814 NESP48681 1621 aa12.32□□□□□ -0.44
PKNOX2-208ENST00000557814 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
PKNOX2-208ENST00000557814 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
PKNOX2-208ENST00000557814 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
PKNOX2-208ENST00000557814 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
PKNOX2-208ENST00000557814 AEBP2Q6ZN18 517 aaPredicted RBP12.16□□□□□ -0.46
PKNOX2-208ENST00000557814 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
PKNOX2-208ENST00000557814 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
PKNOX2-208ENST00000557814 CFTRP13569 1480 aa12.07□□□□□ -0.48
PKNOX2-208ENST00000557814 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
PKNOX2-208ENST00000557814 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
PKNOX2-208ENST00000557814 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
PKNOX2-208ENST00000557814 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
PKNOX2-208ENST00000557814 KIF21AQ7Z4S6 1674 aa12.03□□□□□ -0.48
PKNOX2-208ENST00000557814 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
PKNOX2-208ENST00000557814 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
PKNOX2-208ENST00000557814 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
PKNOX2-208ENST00000557814 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
PKNOX2-208ENST00000557814 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
PKNOX2-208ENST00000557814 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
PKNOX2-208ENST00000557814 WDR62O43379 1518 aa11.91□□□□□ -0.5
PKNOX2-208ENST00000557814 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
PKNOX2-208ENST00000557814 PRDM2Q13029 1718 aa11.88□□□□□ -0.51
PKNOX2-208ENST00000557814 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
PKNOX2-208ENST00000557814 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
PKNOX2-208ENST00000557814 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
PKNOX2-208ENST00000557814 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
PKNOX2-208ENST00000557814 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
PKNOX2-208ENST00000557814 CUX1P39880 1505 aa11.73□□□□□ -0.53
PKNOX2-208ENST00000557814 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
PKNOX2-208ENST00000557814 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
PKNOX2-208ENST00000557814 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
PKNOX2-208ENST00000557814 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
PKNOX2-208ENST00000557814 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
PKNOX2-208ENST00000557814 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
PKNOX2-208ENST00000557814 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
PKNOX2-208ENST00000557814 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
PKNOX2-208ENST00000557814 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
PKNOX2-208ENST00000557814 CHIC1Q5VXU3 224 aa11.61□□□□□ -0.55
PKNOX2-208ENST00000557814 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
PKNOX2-208ENST00000557814 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
PKNOX2-208ENST00000557814 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
PKNOX2-208ENST00000557814 SOGA1O94964 1423 aa11.58□□□□□ -0.56
PKNOX2-208ENST00000557814 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
PKNOX2-208ENST00000557814 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
PKNOX2-208ENST00000557814 CHD1O14646 1710 aa11.5□□□□□ -0.57
PKNOX2-208ENST00000557814 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
PKNOX2-208ENST00000557814 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
PKNOX2-208ENST00000557814 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
PKNOX2-208ENST00000557814 EEA1Q15075 1411 aa11.46□□□□□ -0.57
PKNOX2-208ENST00000557814 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
PKNOX2-208ENST00000557814 FBLN2P98095 1184 aa11.46□□□□□ -0.57
PKNOX2-208ENST00000557814 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
PKNOX2-208ENST00000557814 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
PKNOX2-208ENST00000557814 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
PKNOX2-208ENST00000557814 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
PKNOX2-208ENST00000557814 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
PKNOX2-208ENST00000557814 IGF1RP08069 1367 aa11.43□□□□□ -0.58
PKNOX2-208ENST00000557814 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
PKNOX2-208ENST00000557814 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
PKNOX2-208ENST00000557814 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.59
PKNOX2-208ENST00000557814 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
PKNOX2-208ENST00000557814 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
PKNOX2-208ENST00000557814 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
PKNOX2-208ENST00000557814 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
PKNOX2-208ENST00000557814 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
PKNOX2-208ENST00000557814 CUL7Q14999 1698 aa11.34□□□□□ -0.59
PKNOX2-208ENST00000557814 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms