RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
ITGA7-219ENST00000557488 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
ITGA7-219ENST00000557488 ABCC9O60706 1549 aa30.42■■■□□ 2.46
ITGA7-219ENST00000557488 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
ITGA7-219ENST00000557488 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
ITGA7-219ENST00000557488 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
ITGA7-219ENST00000557488 NACADO15069 1562 aa29.12■■■□□ 2.25
ITGA7-219ENST00000557488 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
ITGA7-219ENST00000557488 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
ITGA7-219ENST00000557488 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
ITGA7-219ENST00000557488 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
ITGA7-219ENST00000557488 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
ITGA7-219ENST00000557488 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
ITGA7-219ENST00000557488 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
ITGA7-219ENST00000557488 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
ITGA7-219ENST00000557488 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
ITGA7-219ENST00000557488 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
ITGA7-219ENST00000557488 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
ITGA7-219ENST00000557488 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
ITGA7-219ENST00000557488 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
ITGA7-219ENST00000557488 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
ITGA7-219ENST00000557488 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
ITGA7-219ENST00000557488 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
ITGA7-219ENST00000557488 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
ITGA7-219ENST00000557488 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
ITGA7-219ENST00000557488 WIZO95785 1651 aa26.81■■□□□ 1.88
ITGA7-219ENST00000557488 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
ITGA7-219ENST00000557488 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
ITGA7-219ENST00000557488 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
ITGA7-219ENST00000557488 NESP48681 1621 aa26.41■■□□□ 1.82
ITGA7-219ENST00000557488 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
ITGA7-219ENST00000557488 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
ITGA7-219ENST00000557488 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
ITGA7-219ENST00000557488 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
ITGA7-219ENST00000557488 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
ITGA7-219ENST00000557488 ERCC6Q03468 1493 aa26.07■■□□□ 1.76
ITGA7-219ENST00000557488 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
ITGA7-219ENST00000557488 CFTRP13569 1480 aa26.02■■□□□ 1.76
ITGA7-219ENST00000557488 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
ITGA7-219ENST00000557488 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
ITGA7-219ENST00000557488 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
ITGA7-219ENST00000557488 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
ITGA7-219ENST00000557488 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
ITGA7-219ENST00000557488 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
ITGA7-219ENST00000557488 CUX2O14529 1486 aa25.72■■□□□ 1.71
ITGA7-219ENST00000557488 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
ITGA7-219ENST00000557488 WDR62O43379 1518 aa25.64■■□□□ 1.7
ITGA7-219ENST00000557488 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
ITGA7-219ENST00000557488 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
ITGA7-219ENST00000557488 CUX1P39880 1505 aa25.37■■□□□ 1.65
ITGA7-219ENST00000557488 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
ITGA7-219ENST00000557488 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
ITGA7-219ENST00000557488 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
ITGA7-219ENST00000557488 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
ITGA7-219ENST00000557488 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
ITGA7-219ENST00000557488 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
ITGA7-219ENST00000557488 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
ITGA7-219ENST00000557488 SOGA1O94964 1423 aa25.19■■□□□ 1.62
ITGA7-219ENST00000557488 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
ITGA7-219ENST00000557488 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
ITGA7-219ENST00000557488 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
ITGA7-219ENST00000557488 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
ITGA7-219ENST00000557488 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
ITGA7-219ENST00000557488 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
ITGA7-219ENST00000557488 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
ITGA7-219ENST00000557488 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
ITGA7-219ENST00000557488 WDR97A6NE52 1622 aa25■■□□□ 1.59
ITGA7-219ENST00000557488 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
ITGA7-219ENST00000557488 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
ITGA7-219ENST00000557488 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
ITGA7-219ENST00000557488 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
ITGA7-219ENST00000557488 GRIN2BQ13224 1484 aa24.81■■□□□ 1.56
ITGA7-219ENST00000557488 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
ITGA7-219ENST00000557488 PBRM1Q86U86 1689 aa24.8■■□□□ 1.56
ITGA7-219ENST00000557488 FBLN2P98095 1184 aa24.79■■□□□ 1.56
ITGA7-219ENST00000557488 CHD1O14646 1710 aa24.78■■□□□ 1.56
ITGA7-219ENST00000557488 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
ITGA7-219ENST00000557488 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
ITGA7-219ENST00000557488 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
ITGA7-219ENST00000557488 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
ITGA7-219ENST00000557488 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
ITGA7-219ENST00000557488 IGF1RP08069 1367 aa24.62■■□□□ 1.53
ITGA7-219ENST00000557488 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
ITGA7-219ENST00000557488 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
ITGA7-219ENST00000557488 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
ITGA7-219ENST00000557488 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
ITGA7-219ENST00000557488 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
ITGA7-219ENST00000557488 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
ITGA7-219ENST00000557488 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
ITGA7-219ENST00000557488 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
ITGA7-219ENST00000557488 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
ITGA7-219ENST00000557488 NUP160Q12769 1436 aa24.41■■□□□ 1.5
ITGA7-219ENST00000557488 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
ITGA7-219ENST00000557488 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
ITGA7-219ENST00000557488 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
ITGA7-219ENST00000557488 CUL7Q14999 1698 aa24.37■■□□□ 1.49
ITGA7-219ENST00000557488 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
ITGA7-219ENST00000557488 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
ITGA7-219ENST00000557488 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
ITGA7-219ENST00000557488 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms