RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
CIPC-207ENST00000556863 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
CIPC-207ENST00000556863 ABCC9O60706 1549 aa29.1■■■□□ 2.25
CIPC-207ENST00000556863 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
CIPC-207ENST00000556863 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
CIPC-207ENST00000556863 NACADO15069 1562 aa28.18■■■□□ 2.1
CIPC-207ENST00000556863 DCAF1Q9Y4B6 1507 aa28.17■■■□□ 2.1
CIPC-207ENST00000556863 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
CIPC-207ENST00000556863 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
CIPC-207ENST00000556863 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.02
CIPC-207ENST00000556863 SCRIBQ14160 1630 aa27.6■■■□□ 2.01
CIPC-207ENST00000556863 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
CIPC-207ENST00000556863 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
CIPC-207ENST00000556863 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
CIPC-207ENST00000556863 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
CIPC-207ENST00000556863 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
CIPC-207ENST00000556863 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
CIPC-207ENST00000556863 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
CIPC-207ENST00000556863 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
CIPC-207ENST00000556863 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
CIPC-207ENST00000556863 DNAJC5BQ9UF47 199 aa26.3■■□□□ 1.8
CIPC-207ENST00000556863 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
CIPC-207ENST00000556863 WIZO95785 1651 aa26.1■■□□□ 1.77
CIPC-207ENST00000556863 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
CIPC-207ENST00000556863 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
CIPC-207ENST00000556863 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
CIPC-207ENST00000556863 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
CIPC-207ENST00000556863 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
CIPC-207ENST00000556863 BAZ1BQ9UIG0 1483 aaKnown RBP25.92■■□□□ 1.74
CIPC-207ENST00000556863 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
CIPC-207ENST00000556863 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CIPC-207ENST00000556863 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
CIPC-207ENST00000556863 NESP48681 1621 aa25.34■■□□□ 1.65
CIPC-207ENST00000556863 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
CIPC-207ENST00000556863 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
CIPC-207ENST00000556863 CFTRP13569 1480 aa25.21■■□□□ 1.63
CIPC-207ENST00000556863 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
CIPC-207ENST00000556863 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
CIPC-207ENST00000556863 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
CIPC-207ENST00000556863 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
CIPC-207ENST00000556863 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
CIPC-207ENST00000556863 CEP164Q9UPV0 1460 aa24.93■■□□□ 1.58
CIPC-207ENST00000556863 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
CIPC-207ENST00000556863 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
CIPC-207ENST00000556863 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
CIPC-207ENST00000556863 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
CIPC-207ENST00000556863 WDR62O43379 1518 aa24.73■■□□□ 1.55
CIPC-207ENST00000556863 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
CIPC-207ENST00000556863 CUX1P39880 1505 aa24.67■■□□□ 1.54
CIPC-207ENST00000556863 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
CIPC-207ENST00000556863 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
CIPC-207ENST00000556863 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
CIPC-207ENST00000556863 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
CIPC-207ENST00000556863 CUX2O14529 1486 aa24.56■■□□□ 1.52
CIPC-207ENST00000556863 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
CIPC-207ENST00000556863 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
CIPC-207ENST00000556863 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
CIPC-207ENST00000556863 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
CIPC-207ENST00000556863 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
CIPC-207ENST00000556863 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
CIPC-207ENST00000556863 SOGA1O94964 1423 aa24.35■■□□□ 1.49
CIPC-207ENST00000556863 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
CIPC-207ENST00000556863 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
CIPC-207ENST00000556863 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
CIPC-207ENST00000556863 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
CIPC-207ENST00000556863 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
CIPC-207ENST00000556863 EIF4G3O43432 1585 aaKnown RBP24.24■■□□□ 1.47
CIPC-207ENST00000556863 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
CIPC-207ENST00000556863 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.46
CIPC-207ENST00000556863 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CIPC-207ENST00000556863 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
CIPC-207ENST00000556863 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
CIPC-207ENST00000556863 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
CIPC-207ENST00000556863 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
CIPC-207ENST00000556863 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
CIPC-207ENST00000556863 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
CIPC-207ENST00000556863 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
CIPC-207ENST00000556863 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
CIPC-207ENST00000556863 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
CIPC-207ENST00000556863 CHD1O14646 1710 aa23.89■■□□□ 1.41
CIPC-207ENST00000556863 IGF1RP08069 1367 aa23.89■■□□□ 1.41
CIPC-207ENST00000556863 CUL7Q14999 1698 aa23.87■■□□□ 1.41
CIPC-207ENST00000556863 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
CIPC-207ENST00000556863 EEA1Q15075 1411 aa23.84■■□□□ 1.41
CIPC-207ENST00000556863 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
CIPC-207ENST00000556863 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
CIPC-207ENST00000556863 FBLN2P98095 1184 aa23.78■■□□□ 1.4
CIPC-207ENST00000556863 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
CIPC-207ENST00000556863 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
CIPC-207ENST00000556863 CSRNP3Q8WYN3 585 aa23.74■■□□□ 1.39
CIPC-207ENST00000556863 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
CIPC-207ENST00000556863 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
CIPC-207ENST00000556863 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
CIPC-207ENST00000556863 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
CIPC-207ENST00000556863 KIF21BO75037 1637 aa23.65■■□□□ 1.38
CIPC-207ENST00000556863 NUP160Q12769 1436 aa23.59■■□□□ 1.37
CIPC-207ENST00000556863 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
CIPC-207ENST00000556863 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
CIPC-207ENST00000556863 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
CIPC-207ENST00000556863 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms