RNA–Protein interactions for RNA: ENST00000556838.5

RBM23-223, Transcript of RNA binding motif protein 23, humanhuman

TSL 2

Gene RBM23, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM23-223ENST00000556838 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.4
RBM23-223ENST00000556838 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
RBM23-223ENST00000556838 ABCC9O60706 1549 aa26.5■■□□□ 1.83
RBM23-223ENST00000556838 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
RBM23-223ENST00000556838 NACADO15069 1562 aa25.15■■□□□ 1.62
RBM23-223ENST00000556838 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
RBM23-223ENST00000556838 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
RBM23-223ENST00000556838 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
RBM23-223ENST00000556838 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
RBM23-223ENST00000556838 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
RBM23-223ENST00000556838 PABPN1Q86U42 306 aaKnown RBP eCLIP24.76■■□□□ 1.55
RBM23-223ENST00000556838 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
RBM23-223ENST00000556838 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
RBM23-223ENST00000556838 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
RBM23-223ENST00000556838 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
RBM23-223ENST00000556838 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
RBM23-223ENST00000556838 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
RBM23-223ENST00000556838 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
RBM23-223ENST00000556838 BAZ1AQ9NRL2 1556 aaPredicted RBP23.28■■□□□ 1.32
RBM23-223ENST00000556838 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
RBM23-223ENST00000556838 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
RBM23-223ENST00000556838 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
RBM23-223ENST00000556838 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
RBM23-223ENST00000556838 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
RBM23-223ENST00000556838 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
RBM23-223ENST00000556838 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
RBM23-223ENST00000556838 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
RBM23-223ENST00000556838 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
RBM23-223ENST00000556838 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
RBM23-223ENST00000556838 WIZO95785 1651 aa22.82■■□□□ 1.24
RBM23-223ENST00000556838 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
RBM23-223ENST00000556838 NESP48681 1621 aa22.77■■□□□ 1.24
RBM23-223ENST00000556838 CUX2O14529 1486 aa22.71■■□□□ 1.23
RBM23-223ENST00000556838 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
RBM23-223ENST00000556838 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
RBM23-223ENST00000556838 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
RBM23-223ENST00000556838 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
RBM23-223ENST00000556838 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
RBM23-223ENST00000556838 CFTRP13569 1480 aa22.38■■□□□ 1.17
RBM23-223ENST00000556838 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
RBM23-223ENST00000556838 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
RBM23-223ENST00000556838 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
RBM23-223ENST00000556838 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
RBM23-223ENST00000556838 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
RBM23-223ENST00000556838 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
RBM23-223ENST00000556838 WDR62O43379 1518 aa22.13■■□□□ 1.13
RBM23-223ENST00000556838 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
RBM23-223ENST00000556838 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
RBM23-223ENST00000556838 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
RBM23-223ENST00000556838 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
RBM23-223ENST00000556838 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
RBM23-223ENST00000556838 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
RBM23-223ENST00000556838 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
RBM23-223ENST00000556838 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
RBM23-223ENST00000556838 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
RBM23-223ENST00000556838 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
RBM23-223ENST00000556838 CUX1P39880 1505 aa21.68■■□□□ 1.06
RBM23-223ENST00000556838 SOGA1O94964 1423 aa21.65■■□□□ 1.06
RBM23-223ENST00000556838 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
RBM23-223ENST00000556838 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
RBM23-223ENST00000556838 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
RBM23-223ENST00000556838 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
RBM23-223ENST00000556838 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
RBM23-223ENST00000556838 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.043e-7■■■■■ 36.6
RBM23-223ENST00000556838 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
RBM23-223ENST00000556838 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
RBM23-223ENST00000556838 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
RBM23-223ENST00000556838 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
RBM23-223ENST00000556838 FBLN2P98095 1184 aa21.46■■□□□ 1.03
RBM23-223ENST00000556838 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
RBM23-223ENST00000556838 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
RBM23-223ENST00000556838 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
RBM23-223ENST00000556838 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
RBM23-223ENST00000556838 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
RBM23-223ENST00000556838 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
RBM23-223ENST00000556838 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
RBM23-223ENST00000556838 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
RBM23-223ENST00000556838 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
RBM23-223ENST00000556838 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
RBM23-223ENST00000556838 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
RBM23-223ENST00000556838 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
RBM23-223ENST00000556838 CHD1O14646 1710 aa21.32■■□□□ 1
RBM23-223ENST00000556838 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
RBM23-223ENST00000556838 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
RBM23-223ENST00000556838 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
RBM23-223ENST00000556838 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
RBM23-223ENST00000556838 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
RBM23-223ENST00000556838 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
RBM23-223ENST00000556838 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
RBM23-223ENST00000556838 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
RBM23-223ENST00000556838 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
RBM23-223ENST00000556838 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
RBM23-223ENST00000556838 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
RBM23-223ENST00000556838 IGF1RP08069 1367 aa21.05■□□□□ 0.96
RBM23-223ENST00000556838 NUP160Q12769 1436 aa21.01■□□□□ 0.95
RBM23-223ENST00000556838 CUL7Q14999 1698 aa20.96■□□□□ 0.95
RBM23-223ENST00000556838 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
RBM23-223ENST00000556838 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
RBM23-223ENST00000556838 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
RBM23-223ENST00000556838 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms