RNA–Protein interactions for RNA: ENST00000555970.5

NEMF-208, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-208ENST00000555970 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
NEMF-208ENST00000555970 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
NEMF-208ENST00000555970 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
NEMF-208ENST00000555970 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
NEMF-208ENST00000555970 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
NEMF-208ENST00000555970 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
NEMF-208ENST00000555970 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
NEMF-208ENST00000555970 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
NEMF-208ENST00000555970 ABCC9O60706 1549 aa12.85□□□□□ -0.35
NEMF-208ENST00000555970 NACADO15069 1562 aa12.79□□□□□ -0.36
NEMF-208ENST00000555970 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
NEMF-208ENST00000555970 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
NEMF-208ENST00000555970 SUPT5HO00267 1087 aaKnown RBP12.49□□□□□ -0.41
NEMF-208ENST00000555970 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
NEMF-208ENST00000555970 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
NEMF-208ENST00000555970 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
NEMF-208ENST00000555970 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
NEMF-208ENST00000555970 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
NEMF-208ENST00000555970 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
NEMF-208ENST00000555970 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
NEMF-208ENST00000555970 WIZO95785 1651 aa12.28□□□□□ -0.44
NEMF-208ENST00000555970 SMARCA4P51532 1647 aa12.27□□□□□ -0.45
NEMF-208ENST00000555970 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
NEMF-208ENST00000555970 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
NEMF-208ENST00000555970 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
NEMF-208ENST00000555970 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
NEMF-208ENST00000555970 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
NEMF-208ENST00000555970 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
NEMF-208ENST00000555970 ATAD2BQ9ULI0 1458 aa11.87□□□□□ -0.51
NEMF-208ENST00000555970 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
NEMF-208ENST00000555970 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
NEMF-208ENST00000555970 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
NEMF-208ENST00000555970 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
NEMF-208ENST00000555970 EEA1Q15075 1411 aa11.82□□□□□ -0.52
NEMF-208ENST00000555970 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
NEMF-208ENST00000555970 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
NEMF-208ENST00000555970 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
NEMF-208ENST00000555970 HRCP23327 699 aa11.78□□□□□ -0.52
NEMF-208ENST00000555970 KIF21BO75037 1637 aa11.76□□□□□ -0.53
NEMF-208ENST00000555970 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
NEMF-208ENST00000555970 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
NEMF-208ENST00000555970 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
NEMF-208ENST00000555970 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
NEMF-208ENST00000555970 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
NEMF-208ENST00000555970 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
NEMF-208ENST00000555970 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
NEMF-208ENST00000555970 SOGA1O94964 1423 aa11.62□□□□□ -0.55
NEMF-208ENST00000555970 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEMF-208ENST00000555970 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
NEMF-208ENST00000555970 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
NEMF-208ENST00000555970 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
NEMF-208ENST00000555970 CFTRP13569 1480 aa11.59□□□□□ -0.55
NEMF-208ENST00000555970 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
NEMF-208ENST00000555970 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
NEMF-208ENST00000555970 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
NEMF-208ENST00000555970 CUX1P39880 1505 aa11.53□□□□□ -0.56
NEMF-208ENST00000555970 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
NEMF-208ENST00000555970 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
NEMF-208ENST00000555970 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
NEMF-208ENST00000555970 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
NEMF-208ENST00000555970 ZEB1P37275 1124 aaPredicted RBP11.41□□□□□ -0.58
NEMF-208ENST00000555970 RAPGEF2Q9Y4G8 1499 aa11.41□□□□□ -0.58
NEMF-208ENST00000555970 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
NEMF-208ENST00000555970 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
NEMF-208ENST00000555970 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
NEMF-208ENST00000555970 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
NEMF-208ENST00000555970 CLIP1P30622 1438 aa11.34□□□□□ -0.59
NEMF-208ENST00000555970 ARAP1Q96P48 1450 aa11.33□□□□□ -0.59
NEMF-208ENST00000555970 LAMC3Q9Y6N6 1575 aa11.33□□□□□ -0.6
NEMF-208ENST00000555970 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
NEMF-208ENST00000555970 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
NEMF-208ENST00000555970 CUL7Q14999 1698 aa11.3□□□□□ -0.6
NEMF-208ENST00000555970 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
NEMF-208ENST00000555970 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
NEMF-208ENST00000555970 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.61
NEMF-208ENST00000555970 CFAP43Q8NDM7 1665 aa11.26□□□□□ -0.61
NEMF-208ENST00000555970 CTTNBP2Q8WZ74 1663 aa11.25□□□□□ -0.61
NEMF-208ENST00000555970 ABCA5Q8WWZ7 1642 aa11.25□□□□□ -0.61
NEMF-208ENST00000555970 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
NEMF-208ENST00000555970 CUX2O14529 1486 aa11.23□□□□□ -0.61
NEMF-208ENST00000555970 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
NEMF-208ENST00000555970 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
NEMF-208ENST00000555970 IGF1RP08069 1367 aa11.2□□□□□ -0.62
NEMF-208ENST00000555970 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
NEMF-208ENST00000555970 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
NEMF-208ENST00000555970 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
NEMF-208ENST00000555970 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
NEMF-208ENST00000555970 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
NEMF-208ENST00000555970 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
NEMF-208ENST00000555970 FOXD1Q16676 465 aa11.17□□□□□ -0.62
NEMF-208ENST00000555970 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
NEMF-208ENST00000555970 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
NEMF-208ENST00000555970 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■■■■□ 22.6
NEMF-208ENST00000555970 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
NEMF-208ENST00000555970 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
NEMF-208ENST00000555970 EHMT2Q96KQ7 1210 aa11.11□□□□□ -0.63
NEMF-208ENST00000555970 PBRM1Q86U86 1689 aa11.11□□□□□ -0.63
NEMF-208ENST00000555970 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
NEMF-208ENST00000555970 NESP48681 1621 aa11.1□□□□□ -0.63
NEMF-208ENST00000555970 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms