RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
GABRB3-208ENST00000555094 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
GABRB3-208ENST00000555094 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.96
GABRB3-208ENST00000555094 ABCC9O60706 1549 aa20.77■□□□□ 0.92
GABRB3-208ENST00000555094 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
GABRB3-208ENST00000555094 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
GABRB3-208ENST00000555094 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
GABRB3-208ENST00000555094 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
GABRB3-208ENST00000555094 NACADO15069 1562 aa20.45■□□□□ 0.86
GABRB3-208ENST00000555094 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
GABRB3-208ENST00000555094 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
GABRB3-208ENST00000555094 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
GABRB3-208ENST00000555094 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
GABRB3-208ENST00000555094 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
GABRB3-208ENST00000555094 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
GABRB3-208ENST00000555094 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
GABRB3-208ENST00000555094 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
GABRB3-208ENST00000555094 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
GABRB3-208ENST00000555094 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
GABRB3-208ENST00000555094 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
GABRB3-208ENST00000555094 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
GABRB3-208ENST00000555094 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
GABRB3-208ENST00000555094 WIZO95785 1651 aa19.22■□□□□ 0.67
GABRB3-208ENST00000555094 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
GABRB3-208ENST00000555094 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
GABRB3-208ENST00000555094 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
GABRB3-208ENST00000555094 SMARCA2P51531 1590 aa19■□□□□ 0.63
GABRB3-208ENST00000555094 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
GABRB3-208ENST00000555094 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
GABRB3-208ENST00000555094 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
GABRB3-208ENST00000555094 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
GABRB3-208ENST00000555094 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
GABRB3-208ENST00000555094 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
GABRB3-208ENST00000555094 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
GABRB3-208ENST00000555094 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
GABRB3-208ENST00000555094 CFTRP13569 1480 aa18.4■□□□□ 0.54
GABRB3-208ENST00000555094 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
GABRB3-208ENST00000555094 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
GABRB3-208ENST00000555094 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
GABRB3-208ENST00000555094 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
GABRB3-208ENST00000555094 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
GABRB3-208ENST00000555094 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
GABRB3-208ENST00000555094 NESP48681 1621 aa18.22■□□□□ 0.51
GABRB3-208ENST00000555094 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
GABRB3-208ENST00000555094 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
GABRB3-208ENST00000555094 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
GABRB3-208ENST00000555094 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.5
GABRB3-208ENST00000555094 CUX1P39880 1505 aa18.13■□□□□ 0.49
GABRB3-208ENST00000555094 KIF21AQ7Z4S6 1674 aa18.08■□□□□ 0.49
GABRB3-208ENST00000555094 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
GABRB3-208ENST00000555094 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
GABRB3-208ENST00000555094 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
GABRB3-208ENST00000555094 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
GABRB3-208ENST00000555094 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
GABRB3-208ENST00000555094 SOGA1O94964 1423 aa17.96■□□□□ 0.47
GABRB3-208ENST00000555094 EEA1Q15075 1411 aa17.93■□□□□ 0.46
GABRB3-208ENST00000555094 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
GABRB3-208ENST00000555094 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
GABRB3-208ENST00000555094 FAM9AQ8IZU1 332 aaPredicted RBP17.89■□□□□ 0.45
GABRB3-208ENST00000555094 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
GABRB3-208ENST00000555094 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
GABRB3-208ENST00000555094 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
GABRB3-208ENST00000555094 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
GABRB3-208ENST00000555094 WDR62O43379 1518 aa17.82■□□□□ 0.44
GABRB3-208ENST00000555094 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
GABRB3-208ENST00000555094 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
GABRB3-208ENST00000555094 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
GABRB3-208ENST00000555094 KIF21BO75037 1637 aa17.77■□□□□ 0.44
GABRB3-208ENST00000555094 CUX2O14529 1486 aa17.77■□□□□ 0.43
GABRB3-208ENST00000555094 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.43
GABRB3-208ENST00000555094 KIF27Q86VH2 1401 aa17.77■□□□□ 0.43
GABRB3-208ENST00000555094 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
GABRB3-208ENST00000555094 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
GABRB3-208ENST00000555094 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
GABRB3-208ENST00000555094 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
GABRB3-208ENST00000555094 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
GABRB3-208ENST00000555094 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
GABRB3-208ENST00000555094 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
GABRB3-208ENST00000555094 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
GABRB3-208ENST00000555094 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
GABRB3-208ENST00000555094 IGF1RP08069 1367 aa17.6■□□□□ 0.41
GABRB3-208ENST00000555094 CUL7Q14999 1698 aa17.59■□□□□ 0.41
GABRB3-208ENST00000555094 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
GABRB3-208ENST00000555094 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
GABRB3-208ENST00000555094 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
GABRB3-208ENST00000555094 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
GABRB3-208ENST00000555094 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
GABRB3-208ENST00000555094 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
GABRB3-208ENST00000555094 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
GABRB3-208ENST00000555094 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
GABRB3-208ENST00000555094 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
GABRB3-208ENST00000555094 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
GABRB3-208ENST00000555094 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
GABRB3-208ENST00000555094 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
GABRB3-208ENST00000555094 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
GABRB3-208ENST00000555094 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
GABRB3-208ENST00000555094 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
GABRB3-208ENST00000555094 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
GABRB3-208ENST00000555094 CLIP1P30622 1438 aa17.36■□□□□ 0.37
GABRB3-208ENST00000555094 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
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