RNA–Protein interactions for RNA: ENST00000555066.1

SIPA1L1-209, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 4

Gene SIPA1L1, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-209ENST00000555066 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
SIPA1L1-209ENST00000555066 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
SIPA1L1-209ENST00000555066 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
SIPA1L1-209ENST00000555066 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
SIPA1L1-209ENST00000555066 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
SIPA1L1-209ENST00000555066 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
SIPA1L1-209ENST00000555066 ABCC9O60706 1549 aa19.18■□□□□ 0.66
SIPA1L1-209ENST00000555066 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
SIPA1L1-209ENST00000555066 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
SIPA1L1-209ENST00000555066 NACADO15069 1562 aa18.61■□□□□ 0.57
SIPA1L1-209ENST00000555066 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
SIPA1L1-209ENST00000555066 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
SIPA1L1-209ENST00000555066 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
SIPA1L1-209ENST00000555066 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
SIPA1L1-209ENST00000555066 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
SIPA1L1-209ENST00000555066 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
SIPA1L1-209ENST00000555066 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
SIPA1L1-209ENST00000555066 FOXD1Q16676 465 aa17.88■□□□□ 0.45
SIPA1L1-209ENST00000555066 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
SIPA1L1-209ENST00000555066 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SIPA1L1-209ENST00000555066 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
SIPA1L1-209ENST00000555066 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
SIPA1L1-209ENST00000555066 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
SIPA1L1-209ENST00000555066 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
SIPA1L1-209ENST00000555066 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SIPA1L1-209ENST00000555066 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
SIPA1L1-209ENST00000555066 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
SIPA1L1-209ENST00000555066 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
SIPA1L1-209ENST00000555066 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
SIPA1L1-209ENST00000555066 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
SIPA1L1-209ENST00000555066 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
SIPA1L1-209ENST00000555066 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SIPA1L1-209ENST00000555066 ADRA2BP18089 450 aa17.09■□□□□ 0.33
SIPA1L1-209ENST00000555066 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
SIPA1L1-209ENST00000555066 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
SIPA1L1-209ENST00000555066 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
SIPA1L1-209ENST00000555066 WIZO95785 1651 aa16.97■□□□□ 0.31
SIPA1L1-209ENST00000555066 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
SIPA1L1-209ENST00000555066 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
SIPA1L1-209ENST00000555066 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
SIPA1L1-209ENST00000555066 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
SIPA1L1-209ENST00000555066 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
SIPA1L1-209ENST00000555066 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
SIPA1L1-209ENST00000555066 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
SIPA1L1-209ENST00000555066 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
SIPA1L1-209ENST00000555066 NESP48681 1621 aa16.59■□□□□ 0.25
SIPA1L1-209ENST00000555066 CFTRP13569 1480 aa16.59■□□□□ 0.25
SIPA1L1-209ENST00000555066 MSH5O43196 834 aa16.48■□□□□ 0.23
SIPA1L1-209ENST00000555066 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
SIPA1L1-209ENST00000555066 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
SIPA1L1-209ENST00000555066 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
SIPA1L1-209ENST00000555066 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
SIPA1L1-209ENST00000555066 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
SIPA1L1-209ENST00000555066 CUX2O14529 1486 aa16.35■□□□□ 0.21
SIPA1L1-209ENST00000555066 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
SIPA1L1-209ENST00000555066 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
SIPA1L1-209ENST00000555066 WDR62O43379 1518 aa16.29■□□□□ 0.2
SIPA1L1-209ENST00000555066 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
SIPA1L1-209ENST00000555066 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
SIPA1L1-209ENST00000555066 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
SIPA1L1-209ENST00000555066 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.18
SIPA1L1-209ENST00000555066 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
SIPA1L1-209ENST00000555066 CUX1P39880 1505 aa16.1■□□□□ 0.17
SIPA1L1-209ENST00000555066 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
SIPA1L1-209ENST00000555066 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
SIPA1L1-209ENST00000555066 SOGA1O94964 1423 aa16.06■□□□□ 0.16
SIPA1L1-209ENST00000555066 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
SIPA1L1-209ENST00000555066 BIVM-ERCC5R4GMW8 1640 aa16.03■□□□□ 0.16
SIPA1L1-209ENST00000555066 SYNJ1O43426 1573 aa16■□□□□ 0.15
SIPA1L1-209ENST00000555066 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
SIPA1L1-209ENST00000555066 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
SIPA1L1-209ENST00000555066 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
SIPA1L1-209ENST00000555066 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
SIPA1L1-209ENST00000555066 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
SIPA1L1-209ENST00000555066 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
SIPA1L1-209ENST00000555066 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
SIPA1L1-209ENST00000555066 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
SIPA1L1-209ENST00000555066 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.13
SIPA1L1-209ENST00000555066 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
SIPA1L1-209ENST00000555066 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
SIPA1L1-209ENST00000555066 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
SIPA1L1-209ENST00000555066 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
SIPA1L1-209ENST00000555066 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
SIPA1L1-209ENST00000555066 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
SIPA1L1-209ENST00000555066 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
SIPA1L1-209ENST00000555066 FBLN2P98095 1184 aa15.77■□□□□ 0.12
SIPA1L1-209ENST00000555066 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
SIPA1L1-209ENST00000555066 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
SIPA1L1-209ENST00000555066 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
SIPA1L1-209ENST00000555066 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
SIPA1L1-209ENST00000555066 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
SIPA1L1-209ENST00000555066 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
SIPA1L1-209ENST00000555066 EEA1Q15075 1411 aa15.69■□□□□ 0.1
SIPA1L1-209ENST00000555066 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
SIPA1L1-209ENST00000555066 IGF1RP08069 1367 aa15.68■□□□□ 0.1
SIPA1L1-209ENST00000555066 CUL7Q14999 1698 aa15.67■□□□□ 0.1
SIPA1L1-209ENST00000555066 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
SIPA1L1-209ENST00000555066 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
SIPA1L1-209ENST00000555066 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
SIPA1L1-209ENST00000555066 CHD1O14646 1710 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms