RNA–Protein interactions for RNA: ENST00000554108.6

CFAP54-205, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 5

Gene CFAP54, Length 2,323 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-205ENST00000554108 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
CFAP54-205ENST00000554108 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
CFAP54-205ENST00000554108 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
CFAP54-205ENST00000554108 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.12
CFAP54-205ENST00000554108 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.12
CFAP54-205ENST00000554108 ABCC9O60706 1549 aa15.73■□□□□ 0.11
CFAP54-205ENST00000554108 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
CFAP54-205ENST00000554108 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
CFAP54-205ENST00000554108 NACADO15069 1562 aa15.48■□□□□ 0.07
CFAP54-205ENST00000554108 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
CFAP54-205ENST00000554108 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
CFAP54-205ENST00000554108 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
CFAP54-205ENST00000554108 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
CFAP54-205ENST00000554108 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
CFAP54-205ENST00000554108 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
CFAP54-205ENST00000554108 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
CFAP54-205ENST00000554108 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
CFAP54-205ENST00000554108 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
CFAP54-205ENST00000554108 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
CFAP54-205ENST00000554108 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
CFAP54-205ENST00000554108 WIZO95785 1651 aa14.72□□□□□ -0.05
CFAP54-205ENST00000554108 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.08
CFAP54-205ENST00000554108 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
CFAP54-205ENST00000554108 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
CFAP54-205ENST00000554108 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
CFAP54-205ENST00000554108 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
CFAP54-205ENST00000554108 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
CFAP54-205ENST00000554108 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
CFAP54-205ENST00000554108 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
CFAP54-205ENST00000554108 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
CFAP54-205ENST00000554108 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
CFAP54-205ENST00000554108 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
CFAP54-205ENST00000554108 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
CFAP54-205ENST00000554108 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
CFAP54-205ENST00000554108 PRDM2Q13029 1718 aa14□□□□□ -0.17
CFAP54-205ENST00000554108 CFTRP13569 1480 aa13.98□□□□□ -0.17
CFAP54-205ENST00000554108 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
CFAP54-205ENST00000554108 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
CFAP54-205ENST00000554108 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
CFAP54-205ENST00000554108 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
CFAP54-205ENST00000554108 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
CFAP54-205ENST00000554108 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
CFAP54-205ENST00000554108 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
CFAP54-205ENST00000554108 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
CFAP54-205ENST00000554108 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
CFAP54-205ENST00000554108 NESP48681 1621 aa13.84□□□□□ -0.19
CFAP54-205ENST00000554108 CUX1P39880 1505 aa13.84□□□□□ -0.19
CFAP54-205ENST00000554108 SOGA1O94964 1423 aa13.84□□□□□ -0.19
CFAP54-205ENST00000554108 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
CFAP54-205ENST00000554108 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
CFAP54-205ENST00000554108 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
CFAP54-205ENST00000554108 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
CFAP54-205ENST00000554108 EEA1Q15075 1411 aa13.76□□□□□ -0.21
CFAP54-205ENST00000554108 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
CFAP54-205ENST00000554108 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
CFAP54-205ENST00000554108 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
CFAP54-205ENST00000554108 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
CFAP54-205ENST00000554108 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
CFAP54-205ENST00000554108 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
CFAP54-205ENST00000554108 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
CFAP54-205ENST00000554108 KIF21BO75037 1637 aa13.64□□□□□ -0.23
CFAP54-205ENST00000554108 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
CFAP54-205ENST00000554108 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
CFAP54-205ENST00000554108 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
CFAP54-205ENST00000554108 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
CFAP54-205ENST00000554108 CUX2O14529 1486 aa13.58□□□□□ -0.24
CFAP54-205ENST00000554108 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
CFAP54-205ENST00000554108 RAPGEF2Q9Y4G8 1499 aa13.56□□□□□ -0.24
CFAP54-205ENST00000554108 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
CFAP54-205ENST00000554108 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
CFAP54-205ENST00000554108 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
CFAP54-205ENST00000554108 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
CFAP54-205ENST00000554108 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
CFAP54-205ENST00000554108 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
CFAP54-205ENST00000554108 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.24
CFAP54-205ENST00000554108 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
CFAP54-205ENST00000554108 IGF1RP08069 1367 aa13.47□□□□□ -0.25
CFAP54-205ENST00000554108 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
CFAP54-205ENST00000554108 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
CFAP54-205ENST00000554108 WDR62O43379 1518 aa13.46□□□□□ -0.26
CFAP54-205ENST00000554108 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
CFAP54-205ENST00000554108 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
CFAP54-205ENST00000554108 CUL7Q14999 1698 aa13.41□□□□□ -0.26
CFAP54-205ENST00000554108 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
CFAP54-205ENST00000554108 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
CFAP54-205ENST00000554108 CLIP1P30622 1438 aa13.4□□□□□ -0.26
CFAP54-205ENST00000554108 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CFAP54-205ENST00000554108 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
CFAP54-205ENST00000554108 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
CFAP54-205ENST00000554108 IFT140Q96RY7 1462 aa13.34□□□□□ -0.27
CFAP54-205ENST00000554108 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
CFAP54-205ENST00000554108 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
CFAP54-205ENST00000554108 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
CFAP54-205ENST00000554108 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
CFAP54-205ENST00000554108 EIF4G3O43432 1585 aaKnown RBP13.3□□□□□ -0.28
CFAP54-205ENST00000554108 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
CFAP54-205ENST00000554108 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
CFAP54-205ENST00000554108 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
CFAP54-205ENST00000554108 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
CFAP54-205ENST00000554108 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms