RNA–Protein interactions for RNA: ENST00000554033.1

AL390254.1-201, humanhuman

TSL 5 BASIC

Gene AL390254.1, Length 465 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390254.1-201ENST00000554033 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
AL390254.1-201ENST00000554033 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
AL390254.1-201ENST00000554033 ABCC9O60706 1549 aa19.73■□□□□ 0.75
AL390254.1-201ENST00000554033 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
AL390254.1-201ENST00000554033 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
AL390254.1-201ENST00000554033 NACADO15069 1562 aa19.08■□□□□ 0.65
AL390254.1-201ENST00000554033 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
AL390254.1-201ENST00000554033 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
AL390254.1-201ENST00000554033 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
AL390254.1-201ENST00000554033 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
AL390254.1-201ENST00000554033 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
AL390254.1-201ENST00000554033 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
AL390254.1-201ENST00000554033 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
AL390254.1-201ENST00000554033 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
AL390254.1-201ENST00000554033 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
AL390254.1-201ENST00000554033 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
AL390254.1-201ENST00000554033 SMARCA4P51532 1647 aa17.91■□□□□ 0.46
AL390254.1-201ENST00000554033 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
AL390254.1-201ENST00000554033 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
AL390254.1-201ENST00000554033 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
AL390254.1-201ENST00000554033 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
AL390254.1-201ENST00000554033 WIZO95785 1651 aa17.75■□□□□ 0.43
AL390254.1-201ENST00000554033 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
AL390254.1-201ENST00000554033 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
AL390254.1-201ENST00000554033 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
AL390254.1-201ENST00000554033 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
AL390254.1-201ENST00000554033 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
AL390254.1-201ENST00000554033 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
AL390254.1-201ENST00000554033 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
AL390254.1-201ENST00000554033 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
AL390254.1-201ENST00000554033 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
AL390254.1-201ENST00000554033 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
AL390254.1-201ENST00000554033 NESP48681 1621 aa17.2■□□□□ 0.34
AL390254.1-201ENST00000554033 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
AL390254.1-201ENST00000554033 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
AL390254.1-201ENST00000554033 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
AL390254.1-201ENST00000554033 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
AL390254.1-201ENST00000554033 CFTRP13569 1480 aa17.07■□□□□ 0.32
AL390254.1-201ENST00000554033 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
AL390254.1-201ENST00000554033 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
AL390254.1-201ENST00000554033 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
AL390254.1-201ENST00000554033 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
AL390254.1-201ENST00000554033 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
AL390254.1-201ENST00000554033 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
AL390254.1-201ENST00000554033 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
AL390254.1-201ENST00000554033 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
AL390254.1-201ENST00000554033 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
AL390254.1-201ENST00000554033 WDR62O43379 1518 aa16.75■□□□□ 0.27
AL390254.1-201ENST00000554033 CUX1P39880 1505 aa16.75■□□□□ 0.27
AL390254.1-201ENST00000554033 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
AL390254.1-201ENST00000554033 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
AL390254.1-201ENST00000554033 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
AL390254.1-201ENST00000554033 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
AL390254.1-201ENST00000554033 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
AL390254.1-201ENST00000554033 TOP2BQ02880 1626 aa16.66■□□□□ 0.26
AL390254.1-201ENST00000554033 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
AL390254.1-201ENST00000554033 CUX2O14529 1486 aa16.6■□□□□ 0.25
AL390254.1-201ENST00000554033 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
AL390254.1-201ENST00000554033 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
AL390254.1-201ENST00000554033 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
AL390254.1-201ENST00000554033 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
AL390254.1-201ENST00000554033 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
AL390254.1-201ENST00000554033 SOGA1O94964 1423 aa16.5■□□□□ 0.23
AL390254.1-201ENST00000554033 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
AL390254.1-201ENST00000554033 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
AL390254.1-201ENST00000554033 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
AL390254.1-201ENST00000554033 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
AL390254.1-201ENST00000554033 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
AL390254.1-201ENST00000554033 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
AL390254.1-201ENST00000554033 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
AL390254.1-201ENST00000554033 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
AL390254.1-201ENST00000554033 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
AL390254.1-201ENST00000554033 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
AL390254.1-201ENST00000554033 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
AL390254.1-201ENST00000554033 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
AL390254.1-201ENST00000554033 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
AL390254.1-201ENST00000554033 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
AL390254.1-201ENST00000554033 CHD1O14646 1710 aa16.24■□□□□ 0.19
AL390254.1-201ENST00000554033 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
AL390254.1-201ENST00000554033 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
AL390254.1-201ENST00000554033 ADAMTS12P58397 1594 aa16.21■□□□□ 0.19
AL390254.1-201ENST00000554033 IGF1RP08069 1367 aa16.2■□□□□ 0.18
AL390254.1-201ENST00000554033 CUL7Q14999 1698 aa16.18■□□□□ 0.18
AL390254.1-201ENST00000554033 MAGI1Q96QZ7 1491 aaPredicted RBP16.17■□□□□ 0.18
AL390254.1-201ENST00000554033 EEA1Q15075 1411 aa16.13■□□□□ 0.17
AL390254.1-201ENST00000554033 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
AL390254.1-201ENST00000554033 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
AL390254.1-201ENST00000554033 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
AL390254.1-201ENST00000554033 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
AL390254.1-201ENST00000554033 FBLN2P98095 1184 aa16.09■□□□□ 0.17
AL390254.1-201ENST00000554033 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
AL390254.1-201ENST00000554033 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
AL390254.1-201ENST00000554033 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
AL390254.1-201ENST00000554033 KIF21BO75037 1637 aa16.05■□□□□ 0.16
AL390254.1-201ENST00000554033 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
AL390254.1-201ENST00000554033 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
AL390254.1-201ENST00000554033 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
AL390254.1-201ENST00000554033 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
AL390254.1-201ENST00000554033 NUP160Q12769 1436 aa15.99■□□□□ 0.15
AL390254.1-201ENST00000554033 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms