RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
PSMC6-204ENST00000553798 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
PSMC6-204ENST00000553798 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
PSMC6-204ENST00000553798 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
PSMC6-204ENST00000553798 ABCC9O60706 1549 aa24.3■■□□□ 1.48
PSMC6-204ENST00000553798 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
PSMC6-204ENST00000553798 NACADO15069 1562 aa23.48■■□□□ 1.35
PSMC6-204ENST00000553798 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
PSMC6-204ENST00000553798 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
PSMC6-204ENST00000553798 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
PSMC6-204ENST00000553798 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
PSMC6-204ENST00000553798 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
PSMC6-204ENST00000553798 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
PSMC6-204ENST00000553798 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
PSMC6-204ENST00000553798 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
PSMC6-204ENST00000553798 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
PSMC6-204ENST00000553798 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
PSMC6-204ENST00000553798 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
PSMC6-204ENST00000553798 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
PSMC6-204ENST00000553798 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
PSMC6-204ENST00000553798 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
PSMC6-204ENST00000553798 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
PSMC6-204ENST00000553798 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
PSMC6-204ENST00000553798 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
PSMC6-204ENST00000553798 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
PSMC6-204ENST00000553798 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
PSMC6-204ENST00000553798 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
PSMC6-204ENST00000553798 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
PSMC6-204ENST00000553798 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
PSMC6-204ENST00000553798 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
PSMC6-204ENST00000553798 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
PSMC6-204ENST00000553798 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
PSMC6-204ENST00000553798 WIZO95785 1651 aa21.44■■□□□ 1.02
PSMC6-204ENST00000553798 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
PSMC6-204ENST00000553798 NESP48681 1621 aa21.07■□□□□ 0.96
PSMC6-204ENST00000553798 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
PSMC6-204ENST00000553798 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
PSMC6-204ENST00000553798 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
PSMC6-204ENST00000553798 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
PSMC6-204ENST00000553798 CFTRP13569 1480 aa20.95■□□□□ 0.94
PSMC6-204ENST00000553798 FOXD1Q16676 465 aa20.94■□□□□ 0.94
PSMC6-204ENST00000553798 PDS5BQ9NTI5 1447 aa20.93■□□□□ 0.94
PSMC6-204ENST00000553798 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
PSMC6-204ENST00000553798 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
PSMC6-204ENST00000553798 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
PSMC6-204ENST00000553798 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
PSMC6-204ENST00000553798 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
PSMC6-204ENST00000553798 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
PSMC6-204ENST00000553798 CUX2O14529 1486 aa20.72■□□□□ 0.91
PSMC6-204ENST00000553798 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
PSMC6-204ENST00000553798 WDR62O43379 1518 aa20.63■□□□□ 0.89
PSMC6-204ENST00000553798 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
PSMC6-204ENST00000553798 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
PSMC6-204ENST00000553798 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
PSMC6-204ENST00000553798 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
PSMC6-204ENST00000553798 CUX1P39880 1505 aa20.35■□□□□ 0.85
PSMC6-204ENST00000553798 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
PSMC6-204ENST00000553798 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
PSMC6-204ENST00000553798 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
PSMC6-204ENST00000553798 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
PSMC6-204ENST00000553798 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
PSMC6-204ENST00000553798 SOGA1O94964 1423 aa20.22■□□□□ 0.83
PSMC6-204ENST00000553798 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
PSMC6-204ENST00000553798 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
PSMC6-204ENST00000553798 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
PSMC6-204ENST00000553798 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
PSMC6-204ENST00000553798 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
PSMC6-204ENST00000553798 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
PSMC6-204ENST00000553798 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
PSMC6-204ENST00000553798 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
PSMC6-204ENST00000553798 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
PSMC6-204ENST00000553798 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
PSMC6-204ENST00000553798 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
PSMC6-204ENST00000553798 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
PSMC6-204ENST00000553798 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
PSMC6-204ENST00000553798 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
PSMC6-204ENST00000553798 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
PSMC6-204ENST00000553798 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
PSMC6-204ENST00000553798 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
PSMC6-204ENST00000553798 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
PSMC6-204ENST00000553798 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
PSMC6-204ENST00000553798 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
PSMC6-204ENST00000553798 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
PSMC6-204ENST00000553798 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
PSMC6-204ENST00000553798 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
PSMC6-204ENST00000553798 CHD1O14646 1710 aa19.81■□□□□ 0.76
PSMC6-204ENST00000553798 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
PSMC6-204ENST00000553798 FBLN2P98095 1184 aa19.79■□□□□ 0.76
PSMC6-204ENST00000553798 MSH5O43196 834 aa19.78■□□□□ 0.76
PSMC6-204ENST00000553798 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
PSMC6-204ENST00000553798 IGF1RP08069 1367 aa19.77■□□□□ 0.76
PSMC6-204ENST00000553798 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
PSMC6-204ENST00000553798 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
PSMC6-204ENST00000553798 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
PSMC6-204ENST00000553798 CUL7Q14999 1698 aa19.66■□□□□ 0.74
PSMC6-204ENST00000553798 NUP160Q12769 1436 aa19.65■□□□□ 0.74
PSMC6-204ENST00000553798 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
PSMC6-204ENST00000553798 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.73
PSMC6-204ENST00000553798 CEP170Q5SW79 1584 aa19.59■□□□□ 0.73
PSMC6-204ENST00000553798 EEA1Q15075 1411 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms