RNA–Protein interactions for RNA: ENST00000553713.5

MLH3-204, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-204ENST00000553713 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
MLH3-204ENST00000553713 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
MLH3-204ENST00000553713 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
MLH3-204ENST00000553713 ABCC9O60706 1549 aa19.53■□□□□ 0.72
MLH3-204ENST00000553713 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
MLH3-204ENST00000553713 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
MLH3-204ENST00000553713 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
MLH3-204ENST00000553713 NACADO15069 1562 aa19.11■□□□□ 0.65
MLH3-204ENST00000553713 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
MLH3-204ENST00000553713 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
MLH3-204ENST00000553713 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
MLH3-204ENST00000553713 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
MLH3-204ENST00000553713 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.54
MLH3-204ENST00000553713 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
MLH3-204ENST00000553713 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
MLH3-204ENST00000553713 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
MLH3-204ENST00000553713 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
MLH3-204ENST00000553713 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
MLH3-204ENST00000553713 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.47
MLH3-204ENST00000553713 SMARCA4P51532 1647 aa17.99■□□□□ 0.47
MLH3-204ENST00000553713 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
MLH3-204ENST00000553713 WIZO95785 1651 aa17.86■□□□□ 0.45
MLH3-204ENST00000553713 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.43
MLH3-204ENST00000553713 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
MLH3-204ENST00000553713 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
MLH3-204ENST00000553713 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
MLH3-204ENST00000553713 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
MLH3-204ENST00000553713 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
MLH3-204ENST00000553713 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
MLH3-204ENST00000553713 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
MLH3-204ENST00000553713 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
MLH3-204ENST00000553713 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
MLH3-204ENST00000553713 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
MLH3-204ENST00000553713 CFTRP13569 1480 aa17.18■□□□□ 0.34
MLH3-204ENST00000553713 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
MLH3-204ENST00000553713 PRDM2Q13029 1718 aa17.08■□□□□ 0.33
MLH3-204ENST00000553713 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
MLH3-204ENST00000553713 NESP48681 1621 aa17.06■□□□□ 0.32
MLH3-204ENST00000553713 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
MLH3-204ENST00000553713 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
MLH3-204ENST00000553713 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
MLH3-204ENST00000553713 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
MLH3-204ENST00000553713 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
MLH3-204ENST00000553713 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
MLH3-204ENST00000553713 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
MLH3-204ENST00000553713 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
MLH3-204ENST00000553713 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
MLH3-204ENST00000553713 CUX1P39880 1505 aa16.87■□□□□ 0.29
MLH3-204ENST00000553713 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
MLH3-204ENST00000553713 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
MLH3-204ENST00000553713 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
MLH3-204ENST00000553713 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
MLH3-204ENST00000553713 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
MLH3-204ENST00000553713 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
MLH3-204ENST00000553713 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
MLH3-204ENST00000553713 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
MLH3-204ENST00000553713 SOGA1O94964 1423 aa16.69■□□□□ 0.26
MLH3-204ENST00000553713 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
MLH3-204ENST00000553713 WDR62O43379 1518 aa16.66■□□□□ 0.26
MLH3-204ENST00000553713 EEA1Q15075 1411 aa16.65■□□□□ 0.26
MLH3-204ENST00000553713 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
MLH3-204ENST00000553713 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
MLH3-204ENST00000553713 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
MLH3-204ENST00000553713 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
MLH3-204ENST00000553713 CUX2O14529 1486 aa16.59■□□□□ 0.25
MLH3-204ENST00000553713 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
MLH3-204ENST00000553713 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
MLH3-204ENST00000553713 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
MLH3-204ENST00000553713 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
MLH3-204ENST00000553713 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
MLH3-204ENST00000553713 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
MLH3-204ENST00000553713 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
MLH3-204ENST00000553713 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
MLH3-204ENST00000553713 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
MLH3-204ENST00000553713 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
MLH3-204ENST00000553713 KIF21BO75037 1637 aa16.43■□□□□ 0.22
MLH3-204ENST00000553713 IGF1RP08069 1367 aa16.43■□□□□ 0.22
MLH3-204ENST00000553713 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
MLH3-204ENST00000553713 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
MLH3-204ENST00000553713 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.22
MLH3-204ENST00000553713 PRXQ9BXM0 1461 aa16.39■□□□□ 0.22
MLH3-204ENST00000553713 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
MLH3-204ENST00000553713 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
MLH3-204ENST00000553713 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
MLH3-204ENST00000553713 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
MLH3-204ENST00000553713 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
MLH3-204ENST00000553713 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
MLH3-204ENST00000553713 CUL7Q14999 1698 aa16.36■□□□□ 0.21
MLH3-204ENST00000553713 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
MLH3-204ENST00000553713 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
MLH3-204ENST00000553713 ADAMTS12P58397 1594 aa16.27■□□□□ 0.19
MLH3-204ENST00000553713 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
MLH3-204ENST00000553713 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
MLH3-204ENST00000553713 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
MLH3-204ENST00000553713 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
MLH3-204ENST00000553713 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
MLH3-204ENST00000553713 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
MLH3-204ENST00000553713 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
MLH3-204ENST00000553713 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
MLH3-204ENST00000553713 CLIP1P30622 1438 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms