RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
UBR7-202ENST00000553674 CCDC180Q9P1Z9 1646 aa38.26■■■■□ 3.71
UBR7-202ENST00000553674 ABCC9O60706 1549 aa36.89■■■■□ 3.5
UBR7-202ENST00000553674 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
UBR7-202ENST00000553674 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
UBR7-202ENST00000553674 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
UBR7-202ENST00000553674 MYO15BQ96JP2 1530 aa35.87■■■■□ 3.33
UBR7-202ENST00000553674 NACADO15069 1562 aa35.84■■■■□ 3.33
UBR7-202ENST00000553674 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
UBR7-202ENST00000553674 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
UBR7-202ENST00000553674 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
UBR7-202ENST00000553674 SHROOM4Q9ULL8 1493 aa34.82■■■■□ 3.16
UBR7-202ENST00000553674 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.15
UBR7-202ENST00000553674 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
UBR7-202ENST00000553674 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
UBR7-202ENST00000553674 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
UBR7-202ENST00000553674 BAZ1AQ9NRL2 1556 aaPredicted RBP33.6■■■□□ 2.97
UBR7-202ENST00000553674 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
UBR7-202ENST00000553674 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
UBR7-202ENST00000553674 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.94
UBR7-202ENST00000553674 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
UBR7-202ENST00000553674 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
UBR7-202ENST00000553674 ATAD2BQ9ULI0 1458 aa33.26■■■□□ 2.92
UBR7-202ENST00000553674 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
UBR7-202ENST00000553674 WIZO95785 1651 aa33.2■■■□□ 2.91
UBR7-202ENST00000553674 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
UBR7-202ENST00000553674 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
UBR7-202ENST00000553674 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
UBR7-202ENST00000553674 HMGXB3Q12766 1538 aa32.97■■■□□ 2.87
UBR7-202ENST00000553674 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
UBR7-202ENST00000553674 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
UBR7-202ENST00000553674 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
UBR7-202ENST00000553674 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
UBR7-202ENST00000553674 NESP48681 1621 aa32.16■■■□□ 2.74
UBR7-202ENST00000553674 CFTRP13569 1480 aa32.15■■■□□ 2.74
UBR7-202ENST00000553674 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
UBR7-202ENST00000553674 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
UBR7-202ENST00000553674 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
UBR7-202ENST00000553674 FANCD2Q9BXW9 1451 aa31.8■■■□□ 2.68
UBR7-202ENST00000553674 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.67
UBR7-202ENST00000553674 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
UBR7-202ENST00000553674 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
UBR7-202ENST00000553674 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
UBR7-202ENST00000553674 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
UBR7-202ENST00000553674 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
UBR7-202ENST00000553674 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
UBR7-202ENST00000553674 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
UBR7-202ENST00000553674 CUX1P39880 1505 aa31.44■■■□□ 2.62
UBR7-202ENST00000553674 TOPBP1Q92547 1522 aa31.39■■■□□ 2.61
UBR7-202ENST00000553674 WDR62O43379 1518 aa31.37■■■□□ 2.61
UBR7-202ENST00000553674 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
UBR7-202ENST00000553674 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
UBR7-202ENST00000553674 CHIC1Q5VXU3 224 aa31.36■■■□□ 2.61
UBR7-202ENST00000553674 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
UBR7-202ENST00000553674 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
UBR7-202ENST00000553674 TRIM41Q8WV44 630 aa31.2■■■□□ 2.59
UBR7-202ENST00000553674 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
UBR7-202ENST00000553674 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
UBR7-202ENST00000553674 CUX2O14529 1486 aa31.14■■■□□ 2.58
UBR7-202ENST00000553674 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
UBR7-202ENST00000553674 SOGA1O94964 1423 aa31.07■■■□□ 2.56
UBR7-202ENST00000553674 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
UBR7-202ENST00000553674 IFT140Q96RY7 1462 aa30.99■■■□□ 2.55
UBR7-202ENST00000553674 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
UBR7-202ENST00000553674 ZNF608Q9ULD9 1512 aaPredicted RBP30.87■■■□□ 2.53
UBR7-202ENST00000553674 WDR97A6NE52 1622 aa30.86■■■□□ 2.53
UBR7-202ENST00000553674 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
UBR7-202ENST00000553674 RUSC2Q8N2Y8 1516 aa30.78■■■□□ 2.52
UBR7-202ENST00000553674 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.52
UBR7-202ENST00000553674 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
UBR7-202ENST00000553674 KIF27Q86VH2 1401 aa30.72■■■□□ 2.51
UBR7-202ENST00000553674 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
UBR7-202ENST00000553674 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
UBR7-202ENST00000553674 IGF1RP08069 1367 aa30.61■■■□□ 2.49
UBR7-202ENST00000553674 FAM9AQ8IZU1 332 aaPredicted RBP30.59■■■□□ 2.49
UBR7-202ENST00000553674 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
UBR7-202ENST00000553674 EEA1Q15075 1411 aa30.56■■■□□ 2.48
UBR7-202ENST00000553674 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
UBR7-202ENST00000553674 CSRNP3Q8WYN3 585 aa30.52■■■□□ 2.48
UBR7-202ENST00000553674 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
UBR7-202ENST00000553674 SNAPC4Q5SXM2 1469 aa30.46■■■□□ 2.47
UBR7-202ENST00000553674 MAGI1Q96QZ7 1491 aaPredicted RBP30.4■■■□□ 2.46
UBR7-202ENST00000553674 CARMIL1Q5VZK9 1371 aa30.39■■■□□ 2.45
UBR7-202ENST00000553674 PRXQ9BXM0 1461 aa30.38■■■□□ 2.45
UBR7-202ENST00000553674 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
UBR7-202ENST00000553674 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
UBR7-202ENST00000553674 CUL7Q14999 1698 aa30.33■■■□□ 2.45
UBR7-202ENST00000553674 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
UBR7-202ENST00000553674 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
UBR7-202ENST00000553674 CHMP7Q8WUX9 453 aaPredicted RBP30.24■■■□□ 2.43
UBR7-202ENST00000553674 FBLN2P98095 1184 aa30.22■■■□□ 2.43
UBR7-202ENST00000553674 KIF21BO75037 1637 aa30.22■■■□□ 2.43
UBR7-202ENST00000553674 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
UBR7-202ENST00000553674 CHD1O14646 1710 aa30.16■■■□□ 2.42
UBR7-202ENST00000553674 EHMT2Q96KQ7 1210 aa30.14■■■□□ 2.42
UBR7-202ENST00000553674 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
UBR7-202ENST00000553674 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
UBR7-202ENST00000553674 NUP160Q12769 1436 aa30.06■■■□□ 2.4
UBR7-202ENST00000553674 CEP170Q5SW79 1584 aa30.04■■■□□ 2.4
UBR7-202ENST00000553674 UBTFP17480 764 aaKnown RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms