RNA–Protein interactions for RNA: ENST00000553623.1

LINC00523-203, long intergenic non-protein coding RNA 523, humanhuman

TSL 3

Gene LINC00523, Length 668 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00523-203ENST00000553623 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
LINC00523-203ENST00000553623 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
LINC00523-203ENST00000553623 ABCC9O60706 1549 aa19.71■□□□□ 0.75
LINC00523-203ENST00000553623 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
LINC00523-203ENST00000553623 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
LINC00523-203ENST00000553623 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
LINC00523-203ENST00000553623 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
LINC00523-203ENST00000553623 NACADO15069 1562 aa18.66■□□□□ 0.58
LINC00523-203ENST00000553623 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
LINC00523-203ENST00000553623 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
LINC00523-203ENST00000553623 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
LINC00523-203ENST00000553623 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
LINC00523-203ENST00000553623 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00523-203ENST00000553623 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
LINC00523-203ENST00000553623 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
LINC00523-203ENST00000553623 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
LINC00523-203ENST00000553623 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
LINC00523-203ENST00000553623 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
LINC00523-203ENST00000553623 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
LINC00523-203ENST00000553623 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
LINC00523-203ENST00000553623 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
LINC00523-203ENST00000553623 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
LINC00523-203ENST00000553623 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
LINC00523-203ENST00000553623 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
LINC00523-203ENST00000553623 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
LINC00523-203ENST00000553623 WIZO95785 1651 aa17.48■□□□□ 0.39
LINC00523-203ENST00000553623 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
LINC00523-203ENST00000553623 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
LINC00523-203ENST00000553623 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
LINC00523-203ENST00000553623 CUX2O14529 1486 aa17.29■□□□□ 0.36
LINC00523-203ENST00000553623 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
LINC00523-203ENST00000553623 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
LINC00523-203ENST00000553623 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
LINC00523-203ENST00000553623 CCDC88BA6NC98 1476 aa17.16■□□□□ 0.34
LINC00523-203ENST00000553623 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
LINC00523-203ENST00000553623 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
LINC00523-203ENST00000553623 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
LINC00523-203ENST00000553623 CFTRP13569 1480 aa16.81■□□□□ 0.28
LINC00523-203ENST00000553623 NESP48681 1621 aa16.79■□□□□ 0.28
LINC00523-203ENST00000553623 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
LINC00523-203ENST00000553623 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
LINC00523-203ENST00000553623 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
LINC00523-203ENST00000553623 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
LINC00523-203ENST00000553623 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
LINC00523-203ENST00000553623 LAMC3Q9Y6N6 1575 aa16.61■□□□□ 0.25
LINC00523-203ENST00000553623 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
LINC00523-203ENST00000553623 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
LINC00523-203ENST00000553623 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
LINC00523-203ENST00000553623 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
LINC00523-203ENST00000553623 EEA1Q15075 1411 aa16.54■□□□□ 0.24
LINC00523-203ENST00000553623 CUX1P39880 1505 aa16.51■□□□□ 0.23
LINC00523-203ENST00000553623 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
LINC00523-203ENST00000553623 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
LINC00523-203ENST00000553623 SOGA1O94964 1423 aa16.42■□□□□ 0.22
LINC00523-203ENST00000553623 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
LINC00523-203ENST00000553623 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
LINC00523-203ENST00000553623 WDR62O43379 1518 aa16.39■□□□□ 0.21
LINC00523-203ENST00000553623 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
LINC00523-203ENST00000553623 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
LINC00523-203ENST00000553623 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
LINC00523-203ENST00000553623 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
LINC00523-203ENST00000553623 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
LINC00523-203ENST00000553623 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
LINC00523-203ENST00000553623 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
LINC00523-203ENST00000553623 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
LINC00523-203ENST00000553623 KIF21BO75037 1637 aa16.29■□□□□ 0.2
LINC00523-203ENST00000553623 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
LINC00523-203ENST00000553623 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
LINC00523-203ENST00000553623 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
LINC00523-203ENST00000553623 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
LINC00523-203ENST00000553623 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
LINC00523-203ENST00000553623 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
LINC00523-203ENST00000553623 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
LINC00523-203ENST00000553623 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
LINC00523-203ENST00000553623 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
LINC00523-203ENST00000553623 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
LINC00523-203ENST00000553623 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
LINC00523-203ENST00000553623 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
LINC00523-203ENST00000553623 IGF1RP08069 1367 aa16.14■□□□□ 0.17
LINC00523-203ENST00000553623 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
LINC00523-203ENST00000553623 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
LINC00523-203ENST00000553623 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
LINC00523-203ENST00000553623 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
LINC00523-203ENST00000553623 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
LINC00523-203ENST00000553623 CUL7Q14999 1698 aa16.05■□□□□ 0.16
LINC00523-203ENST00000553623 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
LINC00523-203ENST00000553623 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
LINC00523-203ENST00000553623 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
LINC00523-203ENST00000553623 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
LINC00523-203ENST00000553623 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
LINC00523-203ENST00000553623 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
LINC00523-203ENST00000553623 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
LINC00523-203ENST00000553623 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
LINC00523-203ENST00000553623 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
LINC00523-203ENST00000553623 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
LINC00523-203ENST00000553623 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
LINC00523-203ENST00000553623 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
LINC00523-203ENST00000553623 CLIP1P30622 1438 aa15.93■□□□□ 0.14
LINC00523-203ENST00000553623 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
LINC00523-203ENST00000553623 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms