RNA–Protein interactions for RNA: ENST00000553433.1

AL583722.3-201, humanhuman

TSL 4 BASIC

Gene AL583722.3, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL583722.3-201ENST00000553433 NISCHQ9Y2I1 1504 aa31.26■■■□□ 2.59
AL583722.3-201ENST00000553433 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
AL583722.3-201ENST00000553433 ABCC9O60706 1549 aa27.24■■□□□ 1.95
AL583722.3-201ENST00000553433 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
AL583722.3-201ENST00000553433 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
AL583722.3-201ENST00000553433 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
AL583722.3-201ENST00000553433 NACADO15069 1562 aa26.03■■□□□ 1.76
AL583722.3-201ENST00000553433 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
AL583722.3-201ENST00000553433 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
AL583722.3-201ENST00000553433 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
AL583722.3-201ENST00000553433 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
AL583722.3-201ENST00000553433 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
AL583722.3-201ENST00000553433 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
AL583722.3-201ENST00000553433 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
AL583722.3-201ENST00000553433 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
AL583722.3-201ENST00000553433 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
AL583722.3-201ENST00000553433 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
AL583722.3-201ENST00000553433 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
AL583722.3-201ENST00000553433 SMARCA4P51532 1647 aa24.26■■□□□ 1.47
AL583722.3-201ENST00000553433 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
AL583722.3-201ENST00000553433 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
AL583722.3-201ENST00000553433 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
AL583722.3-201ENST00000553433 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
AL583722.3-201ENST00000553433 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
AL583722.3-201ENST00000553433 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
AL583722.3-201ENST00000553433 WIZO95785 1651 aa23.93■■□□□ 1.42
AL583722.3-201ENST00000553433 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
AL583722.3-201ENST00000553433 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
AL583722.3-201ENST00000553433 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
AL583722.3-201ENST00000553433 NESP48681 1621 aa23.6■■□□□ 1.37
AL583722.3-201ENST00000553433 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
AL583722.3-201ENST00000553433 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
AL583722.3-201ENST00000553433 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
AL583722.3-201ENST00000553433 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
AL583722.3-201ENST00000553433 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
AL583722.3-201ENST00000553433 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
AL583722.3-201ENST00000553433 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
AL583722.3-201ENST00000553433 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
AL583722.3-201ENST00000553433 CFTRP13569 1480 aa23.24■■□□□ 1.31
AL583722.3-201ENST00000553433 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
AL583722.3-201ENST00000553433 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
AL583722.3-201ENST00000553433 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
AL583722.3-201ENST00000553433 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
AL583722.3-201ENST00000553433 CUX2O14529 1486 aa23.05■■□□□ 1.28
AL583722.3-201ENST00000553433 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
AL583722.3-201ENST00000553433 WDR62O43379 1518 aa22.93■■□□□ 1.26
AL583722.3-201ENST00000553433 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
AL583722.3-201ENST00000553433 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
AL583722.3-201ENST00000553433 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
AL583722.3-201ENST00000553433 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
AL583722.3-201ENST00000553433 CUX1P39880 1505 aa22.66■■□□□ 1.22
AL583722.3-201ENST00000553433 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
AL583722.3-201ENST00000553433 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
AL583722.3-201ENST00000553433 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
AL583722.3-201ENST00000553433 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
AL583722.3-201ENST00000553433 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
AL583722.3-201ENST00000553433 SOGA1O94964 1423 aa22.51■■□□□ 1.19
AL583722.3-201ENST00000553433 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
AL583722.3-201ENST00000553433 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
AL583722.3-201ENST00000553433 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
AL583722.3-201ENST00000553433 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.19
AL583722.3-201ENST00000553433 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
AL583722.3-201ENST00000553433 EIF4G3O43432 1585 aaKnown RBP22.43■■□□□ 1.18
AL583722.3-201ENST00000553433 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
AL583722.3-201ENST00000553433 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
AL583722.3-201ENST00000553433 DNAJC5Q9H3Z4 198 aa22.35■■□□□ 1.17
AL583722.3-201ENST00000553433 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
AL583722.3-201ENST00000553433 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
AL583722.3-201ENST00000553433 FBLN2P98095 1184 aa22.25■■□□□ 1.15
AL583722.3-201ENST00000553433 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
AL583722.3-201ENST00000553433 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
AL583722.3-201ENST00000553433 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
AL583722.3-201ENST00000553433 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
AL583722.3-201ENST00000553433 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
AL583722.3-201ENST00000553433 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
AL583722.3-201ENST00000553433 CHD1O14646 1710 aa22.17■■□□□ 1.14
AL583722.3-201ENST00000553433 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
AL583722.3-201ENST00000553433 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
AL583722.3-201ENST00000553433 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
AL583722.3-201ENST00000553433 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
AL583722.3-201ENST00000553433 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
AL583722.3-201ENST00000553433 ADAMTS12P58397 1594 aa22■■□□□ 1.11
AL583722.3-201ENST00000553433 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
AL583722.3-201ENST00000553433 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
AL583722.3-201ENST00000553433 IGF1RP08069 1367 aa21.95■■□□□ 1.1
AL583722.3-201ENST00000553433 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.1
AL583722.3-201ENST00000553433 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
AL583722.3-201ENST00000553433 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
AL583722.3-201ENST00000553433 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
AL583722.3-201ENST00000553433 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
AL583722.3-201ENST00000553433 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
AL583722.3-201ENST00000553433 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
AL583722.3-201ENST00000553433 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
AL583722.3-201ENST00000553433 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
AL583722.3-201ENST00000553433 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
AL583722.3-201ENST00000553433 CUL7Q14999 1698 aa21.82■■□□□ 1.08
AL583722.3-201ENST00000553433 NUP160Q12769 1436 aa21.8■■□□□ 1.08
AL583722.3-201ENST00000553433 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
AL583722.3-201ENST00000553433 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
AL583722.3-201ENST00000553433 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms