RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 NISCHQ9Y2I1 1504 aa48.84■■■■■ 5.41
SDR39U1-204ENST00000553343 CCDC180Q9P1Z9 1646 aa43.31■■■■■ 4.52
SDR39U1-204ENST00000553343 ABCC9O60706 1549 aa41.48■■■■■ 4.23
SDR39U1-204ENST00000553343 ZCCHC6Q5VYS8 1495 aaKnown RBP40.85■■■■■ 4.13
SDR39U1-204ENST00000553343 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
SDR39U1-204ENST00000553343 MYO15BQ96JP2 1530 aa40.61■■■■■ 4.09
SDR39U1-204ENST00000553343 NACADO15069 1562 aa40.53■■■■■ 4.08
SDR39U1-204ENST00000553343 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
SDR39U1-204ENST00000553343 DCAF8L2P0C7V8 631 aa40.25■■■■■ 4.03
SDR39U1-204ENST00000553343 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
SDR39U1-204ENST00000553343 SCRIBQ14160 1630 aa39.32■■■■□ 3.88
SDR39U1-204ENST00000553343 BICRAQ9NZM4 1560 aa39.05■■■■□ 3.84
SDR39U1-204ENST00000553343 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
SDR39U1-204ENST00000553343 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.792e-8■□□□□ 11.2
SDR39U1-204ENST00000553343 EIF4G1Q04637 1599 aaKnown RBP38■■■■□ 3.67
SDR39U1-204ENST00000553343 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
SDR39U1-204ENST00000553343 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
SDR39U1-204ENST00000553343 SMARCA4P51532 1647 aa37.78■■■■□ 3.64
SDR39U1-204ENST00000553343 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
SDR39U1-204ENST00000553343 MROH2BQ7Z745 1585 aa37.56■■■■□ 3.6
SDR39U1-204ENST00000553343 PEG3Q9GZU2 1588 aa37.51■■■■□ 3.6
SDR39U1-204ENST00000553343 SMARCA2P51531 1590 aa37.48■■■■□ 3.59
SDR39U1-204ENST00000553343 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
SDR39U1-204ENST00000553343 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
SDR39U1-204ENST00000553343 RSF1Q96T23 1441 aaPredicted RBP37.37■■■■□ 3.57
SDR39U1-204ENST00000553343 NCAPD3P42695 1498 aa37.34■■■■□ 3.57
SDR39U1-204ENST00000553343 HMGXB3Q12766 1538 aa37.28■■■■□ 3.56
SDR39U1-204ENST00000553343 WIZO95785 1651 aa37.18■■■■□ 3.54
SDR39U1-204ENST00000553343 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.53
SDR39U1-204ENST00000553343 TOP2AP11388 1531 aaKnown RBP36.95■■■■□ 3.51
SDR39U1-204ENST00000553343 SUPT5HO00267 1087 aaKnown RBP36.68■■■■□ 3.46
SDR39U1-204ENST00000553343 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
SDR39U1-204ENST00000553343 LAMC3Q9Y6N6 1575 aa36.31■■■■□ 3.4
SDR39U1-204ENST00000553343 CADPSQ9ULU8 1353 aa36.24■■■■□ 3.39
SDR39U1-204ENST00000553343 CFTRP13569 1480 aa36.18■■■■□ 3.38
SDR39U1-204ENST00000553343 PRDM2Q13029 1718 aa36.05■■■■□ 3.36
SDR39U1-204ENST00000553343 NESP48681 1621 aa36.05■■■■□ 3.36
SDR39U1-204ENST00000553343 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
SDR39U1-204ENST00000553343 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
SDR39U1-204ENST00000553343 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
SDR39U1-204ENST00000553343 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
SDR39U1-204ENST00000553343 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
SDR39U1-204ENST00000553343 MRC2Q9UBG0 1479 aa35.56■■■■□ 3.28
SDR39U1-204ENST00000553343 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
SDR39U1-204ENST00000553343 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
SDR39U1-204ENST00000553343 WDR62O43379 1518 aa35.46■■■■□ 3.27
SDR39U1-204ENST00000553343 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
SDR39U1-204ENST00000553343 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
SDR39U1-204ENST00000553343 CUX2O14529 1486 aa35.34■■■■□ 3.25
SDR39U1-204ENST00000553343 TOPBP1Q92547 1522 aa35.3■■■■□ 3.24
SDR39U1-204ENST00000553343 WRNQ14191 1432 aaPredicted RBP eCLIP35.26■■■■□ 3.24
SDR39U1-204ENST00000553343 CUX1P39880 1505 aa35.22■■■■□ 3.23
SDR39U1-204ENST00000553343 BIVM-ERCC5R4GMW8 1640 aa35.19■■■■□ 3.22
SDR39U1-204ENST00000553343 TOP2BQ02880 1626 aa35.18■■■■□ 3.22
SDR39U1-204ENST00000553343 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
SDR39U1-204ENST00000553343 POLA1P09884 1462 aaPredicted RBP35.03■■■■□ 3.2
SDR39U1-204ENST00000553343 FGD5Q6ZNL6 1462 aa35.02■■■■□ 3.2
SDR39U1-204ENST00000553343 IFT140Q96RY7 1462 aa34.99■■■■□ 3.19
SDR39U1-204ENST00000553343 TARBP1Q13395 1621 aaKnown RBP34.89■■■■□ 3.18
SDR39U1-204ENST00000553343 SOGA1O94964 1423 aa34.88■■■■□ 3.17
SDR39U1-204ENST00000553343 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
SDR39U1-204ENST00000553343 ABCA10Q8WWZ4 1543 aa34.8■■■■□ 3.16
SDR39U1-204ENST00000553343 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
SDR39U1-204ENST00000553343 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
SDR39U1-204ENST00000553343 CHIC1Q5VXU3 224 aa34.67■■■■□ 3.14
SDR39U1-204ENST00000553343 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
SDR39U1-204ENST00000553343 ZNF608Q9ULD9 1512 aaPredicted RBP34.61■■■■□ 3.13
SDR39U1-204ENST00000553343 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
SDR39U1-204ENST00000553343 KIF27Q86VH2 1401 aa34.52■■■■□ 3.12
SDR39U1-204ENST00000553343 GAPVD1Q14C86 1478 aa34.52■■■■□ 3.12
SDR39U1-204ENST00000553343 TDRD9Q8NDG6 1382 aaKnown RBP34.51■■■■□ 3.12
SDR39U1-204ENST00000553343 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.11
SDR39U1-204ENST00000553343 GRIN2BQ13224 1484 aa34.46■■■■□ 3.11
SDR39U1-204ENST00000553343 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
SDR39U1-204ENST00000553343 ERICH3Q5RHP9 1530 aa34.43■■■■□ 3.1
SDR39U1-204ENST00000553343 MAGI1Q96QZ7 1491 aaPredicted RBP34.37■■■■□ 3.09
SDR39U1-204ENST00000553343 EEA1Q15075 1411 aa34.37■■■■□ 3.09
SDR39U1-204ENST00000553343 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
SDR39U1-204ENST00000553343 CUL7Q14999 1698 aa34.25■■■■□ 3.07
SDR39U1-204ENST00000553343 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
SDR39U1-204ENST00000553343 IGF1RP08069 1367 aa34.22■■■■□ 3.07
SDR39U1-204ENST00000553343 FHAD1B1AJZ9 1412 aa34.18■■■■□ 3.06
SDR39U1-204ENST00000553343 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
SDR39U1-204ENST00000553343 RUSC2Q8N2Y8 1516 aa34.18■■■■□ 3.06
SDR39U1-204ENST00000553343 CHD1O14646 1710 aa34.04■■■■□ 3.04
SDR39U1-204ENST00000553343 CARMIL1Q5VZK9 1371 aa34.04■■■■□ 3.04
SDR39U1-204ENST00000553343 CSRNP3Q8WYN3 585 aa34.03■■■■□ 3.04
SDR39U1-204ENST00000553343 GRIN2AQ12879 1464 aa34.01■■■■□ 3.03
SDR39U1-204ENST00000553343 CHMP7Q8WUX9 453 aaPredicted RBP34■■■■□ 3.03
SDR39U1-204ENST00000553343 PRXQ9BXM0 1461 aa34■■■■□ 3.03
SDR39U1-204ENST00000553343 RAPGEF2Q9Y4G8 1499 aa33.96■■■■□ 3.03
SDR39U1-204ENST00000553343 KIF21BO75037 1637 aa33.9■■■■□ 3.02
SDR39U1-204ENST00000553343 FBLN2P98095 1184 aa33.88■■■■□ 3.01
SDR39U1-204ENST00000553343 NUP160Q12769 1436 aa33.86■■■■□ 3.01
SDR39U1-204ENST00000553343 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
SDR39U1-204ENST00000553343 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
SDR39U1-204ENST00000553343 CEP170Q5SW79 1584 aa33.77■■■■□ 3
SDR39U1-204ENST00000553343 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
SDR39U1-204ENST00000553343 GOLGA3Q08378 1498 aa33.7■■■□□ 2.99
SDR39U1-204ENST00000553343 KIAA0586Q9BVV6 1533 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms