RNA–Protein interactions for RNA: ENST00000553276.1

ITGA7-204, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 972 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-204ENST00000553276 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
ITGA7-204ENST00000553276 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
ITGA7-204ENST00000553276 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
ITGA7-204ENST00000553276 ABCC9O60706 1549 aa28.96■■■□□ 2.23
ITGA7-204ENST00000553276 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
ITGA7-204ENST00000553276 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
ITGA7-204ENST00000553276 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
ITGA7-204ENST00000553276 NACADO15069 1562 aa28.46■■■□□ 2.15
ITGA7-204ENST00000553276 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
ITGA7-204ENST00000553276 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
ITGA7-204ENST00000553276 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
ITGA7-204ENST00000553276 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
ITGA7-204ENST00000553276 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
ITGA7-204ENST00000553276 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
ITGA7-204ENST00000553276 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
ITGA7-204ENST00000553276 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
ITGA7-204ENST00000553276 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
ITGA7-204ENST00000553276 RSF1Q96T23 1441 aaPredicted RBP26.77■■□□□ 1.88
ITGA7-204ENST00000553276 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
ITGA7-204ENST00000553276 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
ITGA7-204ENST00000553276 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
ITGA7-204ENST00000553276 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
ITGA7-204ENST00000553276 WIZO95785 1651 aa26.42■■□□□ 1.82
ITGA7-204ENST00000553276 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
ITGA7-204ENST00000553276 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
ITGA7-204ENST00000553276 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
ITGA7-204ENST00000553276 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
ITGA7-204ENST00000553276 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
ITGA7-204ENST00000553276 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
ITGA7-204ENST00000553276 HMGXB3Q12766 1538 aa26.16■■□□□ 1.78
ITGA7-204ENST00000553276 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
ITGA7-204ENST00000553276 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
ITGA7-204ENST00000553276 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
ITGA7-204ENST00000553276 CFTRP13569 1480 aa25.56■■□□□ 1.68
ITGA7-204ENST00000553276 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
ITGA7-204ENST00000553276 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
ITGA7-204ENST00000553276 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
ITGA7-204ENST00000553276 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
ITGA7-204ENST00000553276 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
ITGA7-204ENST00000553276 NESP48681 1621 aa25.28■■□□□ 1.64
ITGA7-204ENST00000553276 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
ITGA7-204ENST00000553276 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
ITGA7-204ENST00000553276 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
ITGA7-204ENST00000553276 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
ITGA7-204ENST00000553276 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
ITGA7-204ENST00000553276 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
ITGA7-204ENST00000553276 CUX1P39880 1505 aa25■■□□□ 1.59
ITGA7-204ENST00000553276 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
ITGA7-204ENST00000553276 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
ITGA7-204ENST00000553276 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
ITGA7-204ENST00000553276 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
ITGA7-204ENST00000553276 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
ITGA7-204ENST00000553276 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
ITGA7-204ENST00000553276 URB2Q14146 1524 aaKnown RBP24.87■■□□□ 1.57
ITGA7-204ENST00000553276 EEA1Q15075 1411 aa24.81■■□□□ 1.56
ITGA7-204ENST00000553276 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
ITGA7-204ENST00000553276 SOGA1O94964 1423 aa24.74■■□□□ 1.55
ITGA7-204ENST00000553276 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
ITGA7-204ENST00000553276 WDR62O43379 1518 aa24.74■■□□□ 1.55
ITGA7-204ENST00000553276 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
ITGA7-204ENST00000553276 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ITGA7-204ENST00000553276 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
ITGA7-204ENST00000553276 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
ITGA7-204ENST00000553276 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
ITGA7-204ENST00000553276 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
ITGA7-204ENST00000553276 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
ITGA7-204ENST00000553276 CUX2O14529 1486 aa24.6■■□□□ 1.53
ITGA7-204ENST00000553276 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
ITGA7-204ENST00000553276 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
ITGA7-204ENST00000553276 IGF1RP08069 1367 aa24.47■■□□□ 1.51
ITGA7-204ENST00000553276 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
ITGA7-204ENST00000553276 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
ITGA7-204ENST00000553276 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.5
ITGA7-204ENST00000553276 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
ITGA7-204ENST00000553276 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
ITGA7-204ENST00000553276 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
ITGA7-204ENST00000553276 ERICH3Q5RHP9 1530 aa24.36■■□□□ 1.49
ITGA7-204ENST00000553276 KIF21BO75037 1637 aa24.36■■□□□ 1.49
ITGA7-204ENST00000553276 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
ITGA7-204ENST00000553276 GOLGA3Q08378 1498 aa24.34■■□□□ 1.49
ITGA7-204ENST00000553276 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
ITGA7-204ENST00000553276 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
ITGA7-204ENST00000553276 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
ITGA7-204ENST00000553276 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
ITGA7-204ENST00000553276 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
ITGA7-204ENST00000553276 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
ITGA7-204ENST00000553276 CUL7Q14999 1698 aa24.27■■□□□ 1.48
ITGA7-204ENST00000553276 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
ITGA7-204ENST00000553276 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
ITGA7-204ENST00000553276 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
ITGA7-204ENST00000553276 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
ITGA7-204ENST00000553276 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
ITGA7-204ENST00000553276 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
ITGA7-204ENST00000553276 ADAMTS12P58397 1594 aa24.08■■□□□ 1.45
ITGA7-204ENST00000553276 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
ITGA7-204ENST00000553276 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
ITGA7-204ENST00000553276 CEP162Q5TB80 1403 aa24■■□□□ 1.43
ITGA7-204ENST00000553276 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
ITGA7-204ENST00000553276 FBLN2P98095 1184 aa23.96■■□□□ 1.43
ITGA7-204ENST00000553276 CLIP1P30622 1438 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms