RNA–Protein interactions for RNA: ENST00000553114.5

RPH3A-227, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-227ENST00000553114 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
RPH3A-227ENST00000553114 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
RPH3A-227ENST00000553114 ABCC9O60706 1549 aa22.57■■□□□ 1.2
RPH3A-227ENST00000553114 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
RPH3A-227ENST00000553114 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
RPH3A-227ENST00000553114 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
RPH3A-227ENST00000553114 NACADO15069 1562 aa22.04■■□□□ 1.12
RPH3A-227ENST00000553114 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
RPH3A-227ENST00000553114 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
RPH3A-227ENST00000553114 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
RPH3A-227ENST00000553114 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
RPH3A-227ENST00000553114 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
RPH3A-227ENST00000553114 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
RPH3A-227ENST00000553114 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
RPH3A-227ENST00000553114 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
RPH3A-227ENST00000553114 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
RPH3A-227ENST00000553114 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
RPH3A-227ENST00000553114 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
RPH3A-227ENST00000553114 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
RPH3A-227ENST00000553114 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
RPH3A-227ENST00000553114 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
RPH3A-227ENST00000553114 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
RPH3A-227ENST00000553114 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
RPH3A-227ENST00000553114 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
RPH3A-227ENST00000553114 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
RPH3A-227ENST00000553114 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
RPH3A-227ENST00000553114 WIZO95785 1651 aa20.26■□□□□ 0.83
RPH3A-227ENST00000553114 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
RPH3A-227ENST00000553114 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
RPH3A-227ENST00000553114 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
RPH3A-227ENST00000553114 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
RPH3A-227ENST00000553114 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
RPH3A-227ENST00000553114 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
RPH3A-227ENST00000553114 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
RPH3A-227ENST00000553114 CFTRP13569 1480 aa19.69■□□□□ 0.74
RPH3A-227ENST00000553114 NESP48681 1621 aa19.63■□□□□ 0.73
RPH3A-227ENST00000553114 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
RPH3A-227ENST00000553114 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
RPH3A-227ENST00000553114 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
RPH3A-227ENST00000553114 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
RPH3A-227ENST00000553114 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
RPH3A-227ENST00000553114 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
RPH3A-227ENST00000553114 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
RPH3A-227ENST00000553114 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
RPH3A-227ENST00000553114 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
RPH3A-227ENST00000553114 WDR62O43379 1518 aa19.26■□□□□ 0.67
RPH3A-227ENST00000553114 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
RPH3A-227ENST00000553114 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
RPH3A-227ENST00000553114 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
RPH3A-227ENST00000553114 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
RPH3A-227ENST00000553114 CUX2O14529 1486 aa19.17■□□□□ 0.66
RPH3A-227ENST00000553114 CUX1P39880 1505 aa19.17■□□□□ 0.66
RPH3A-227ENST00000553114 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
RPH3A-227ENST00000553114 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
RPH3A-227ENST00000553114 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
RPH3A-227ENST00000553114 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
RPH3A-227ENST00000553114 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
RPH3A-227ENST00000553114 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
RPH3A-227ENST00000553114 SOGA1O94964 1423 aa19■□□□□ 0.63
RPH3A-227ENST00000553114 TRIM41Q8WV44 630 aa19■□□□□ 0.63
RPH3A-227ENST00000553114 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
RPH3A-227ENST00000553114 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
RPH3A-227ENST00000553114 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
RPH3A-227ENST00000553114 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
RPH3A-227ENST00000553114 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
RPH3A-227ENST00000553114 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
RPH3A-227ENST00000553114 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
RPH3A-227ENST00000553114 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
RPH3A-227ENST00000553114 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
RPH3A-227ENST00000553114 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
RPH3A-227ENST00000553114 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
RPH3A-227ENST00000553114 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
RPH3A-227ENST00000553114 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
RPH3A-227ENST00000553114 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
RPH3A-227ENST00000553114 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
RPH3A-227ENST00000553114 EEA1Q15075 1411 aa18.71■□□□□ 0.59
RPH3A-227ENST00000553114 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
RPH3A-227ENST00000553114 IGF1RP08069 1367 aa18.67■□□□□ 0.58
RPH3A-227ENST00000553114 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
RPH3A-227ENST00000553114 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.57
RPH3A-227ENST00000553114 CUL7Q14999 1698 aa18.61■□□□□ 0.57
RPH3A-227ENST00000553114 FHAD1B1AJZ9 1412 aa18.6■□□□□ 0.57
RPH3A-227ENST00000553114 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
RPH3A-227ENST00000553114 SYNJ2O15056 1496 aa18.59■□□□□ 0.57
RPH3A-227ENST00000553114 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
RPH3A-227ENST00000553114 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
RPH3A-227ENST00000553114 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
RPH3A-227ENST00000553114 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
RPH3A-227ENST00000553114 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
RPH3A-227ENST00000553114 CHD1O14646 1710 aa18.52■□□□□ 0.55
RPH3A-227ENST00000553114 GRIN2AQ12879 1464 aa18.5■□□□□ 0.55
RPH3A-227ENST00000553114 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
RPH3A-227ENST00000553114 FBLN2P98095 1184 aa18.49■□□□□ 0.55
RPH3A-227ENST00000553114 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
RPH3A-227ENST00000553114 KIF21BO75037 1637 aa18.45■□□□□ 0.54
RPH3A-227ENST00000553114 NUP160Q12769 1436 aa18.41■□□□□ 0.54
RPH3A-227ENST00000553114 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
RPH3A-227ENST00000553114 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
RPH3A-227ENST00000553114 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.53
RPH3A-227ENST00000553114 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms