RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
ACTR6-213ENST00000553038 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
ACTR6-213ENST00000553038 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.84
ACTR6-213ENST00000553038 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
ACTR6-213ENST00000553038 ABCC9O60706 1549 aa26.34■■□□□ 1.81
ACTR6-213ENST00000553038 DCAF1Q9Y4B6 1507 aa26.1■■□□□ 1.77
ACTR6-213ENST00000553038 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
ACTR6-213ENST00000553038 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
ACTR6-213ENST00000553038 NACADO15069 1562 aa25.77■■□□□ 1.72
ACTR6-213ENST00000553038 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
ACTR6-213ENST00000553038 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
ACTR6-213ENST00000553038 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
ACTR6-213ENST00000553038 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
ACTR6-213ENST00000553038 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
ACTR6-213ENST00000553038 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
ACTR6-213ENST00000553038 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
ACTR6-213ENST00000553038 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
ACTR6-213ENST00000553038 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
ACTR6-213ENST00000553038 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
ACTR6-213ENST00000553038 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
ACTR6-213ENST00000553038 WIZO95785 1651 aa24.31■■□□□ 1.48
ACTR6-213ENST00000553038 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
ACTR6-213ENST00000553038 TOP2AP11388 1531 aaKnown RBP24.03■■□□□ 1.44
ACTR6-213ENST00000553038 SMARCA2P51531 1590 aa24■■□□□ 1.43
ACTR6-213ENST00000553038 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
ACTR6-213ENST00000553038 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
ACTR6-213ENST00000553038 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
ACTR6-213ENST00000553038 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
ACTR6-213ENST00000553038 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
ACTR6-213ENST00000553038 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
ACTR6-213ENST00000553038 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
ACTR6-213ENST00000553038 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
ACTR6-213ENST00000553038 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
ACTR6-213ENST00000553038 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
ACTR6-213ENST00000553038 CFTRP13569 1480 aa23.23■■□□□ 1.31
ACTR6-213ENST00000553038 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
ACTR6-213ENST00000553038 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
ACTR6-213ENST00000553038 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
ACTR6-213ENST00000553038 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
ACTR6-213ENST00000553038 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
ACTR6-213ENST00000553038 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
ACTR6-213ENST00000553038 NESP48681 1621 aa23.06■■□□□ 1.28
ACTR6-213ENST00000553038 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
ACTR6-213ENST00000553038 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
ACTR6-213ENST00000553038 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
ACTR6-213ENST00000553038 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
ACTR6-213ENST00000553038 CUX1P39880 1505 aa22.91■■□□□ 1.26
ACTR6-213ENST00000553038 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.26
ACTR6-213ENST00000553038 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
ACTR6-213ENST00000553038 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
ACTR6-213ENST00000553038 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
ACTR6-213ENST00000553038 SOGA1O94964 1423 aa22.86■■□□□ 1.25
ACTR6-213ENST00000553038 EEA1Q15075 1411 aa22.77■■□□□ 1.23
ACTR6-213ENST00000553038 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
ACTR6-213ENST00000553038 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
ACTR6-213ENST00000553038 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
ACTR6-213ENST00000553038 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.23
ACTR6-213ENST00000553038 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
ACTR6-213ENST00000553038 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
ACTR6-213ENST00000553038 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
ACTR6-213ENST00000553038 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
ACTR6-213ENST00000553038 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
ACTR6-213ENST00000553038 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.21
ACTR6-213ENST00000553038 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.21
ACTR6-213ENST00000553038 CUX2O14529 1486 aa22.58■■□□□ 1.2
ACTR6-213ENST00000553038 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
ACTR6-213ENST00000553038 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.19
ACTR6-213ENST00000553038 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
ACTR6-213ENST00000553038 KIF21BO75037 1637 aa22.45■■□□□ 1.18
ACTR6-213ENST00000553038 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
ACTR6-213ENST00000553038 WDR62O43379 1518 aa22.41■■□□□ 1.18
ACTR6-213ENST00000553038 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
ACTR6-213ENST00000553038 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
ACTR6-213ENST00000553038 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
ACTR6-213ENST00000553038 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
ACTR6-213ENST00000553038 IGF1RP08069 1367 aa22.36■■□□□ 1.17
ACTR6-213ENST00000553038 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
ACTR6-213ENST00000553038 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
ACTR6-213ENST00000553038 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
ACTR6-213ENST00000553038 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
ACTR6-213ENST00000553038 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
ACTR6-213ENST00000553038 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
ACTR6-213ENST00000553038 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
ACTR6-213ENST00000553038 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
ACTR6-213ENST00000553038 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
ACTR6-213ENST00000553038 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.15
ACTR6-213ENST00000553038 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.156e-9■■■■■ 45.1
ACTR6-213ENST00000553038 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
ACTR6-213ENST00000553038 CUL7Q14999 1698 aa22.2■■□□□ 1.14
ACTR6-213ENST00000553038 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
ACTR6-213ENST00000553038 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
ACTR6-213ENST00000553038 CLIP1P30622 1438 aa22.15■■□□□ 1.14
ACTR6-213ENST00000553038 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
ACTR6-213ENST00000553038 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
ACTR6-213ENST00000553038 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
ACTR6-213ENST00000553038 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
ACTR6-213ENST00000553038 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
ACTR6-213ENST00000553038 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
ACTR6-213ENST00000553038 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
ACTR6-213ENST00000553038 CTTNBP2Q8WZ74 1663 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms