RNA–Protein interactions for RNA: ENST00000552924.1

TUBA1A-209, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-209ENST00000552924 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
TUBA1A-209ENST00000552924 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
TUBA1A-209ENST00000552924 ABCC9O60706 1549 aa28.31■■■□□ 2.12
TUBA1A-209ENST00000552924 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
TUBA1A-209ENST00000552924 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
TUBA1A-209ENST00000552924 NACADO15069 1562 aa27.18■■□□□ 1.94
TUBA1A-209ENST00000552924 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
TUBA1A-209ENST00000552924 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
TUBA1A-209ENST00000552924 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
TUBA1A-209ENST00000552924 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
TUBA1A-209ENST00000552924 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
TUBA1A-209ENST00000552924 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
TUBA1A-209ENST00000552924 BICRAQ9NZM4 1560 aa26.28■■□□□ 1.8
TUBA1A-209ENST00000552924 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
TUBA1A-209ENST00000552924 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
TUBA1A-209ENST00000552924 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
TUBA1A-209ENST00000552924 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
TUBA1A-209ENST00000552924 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
TUBA1A-209ENST00000552924 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
TUBA1A-209ENST00000552924 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
TUBA1A-209ENST00000552924 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
TUBA1A-209ENST00000552924 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
TUBA1A-209ENST00000552924 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
TUBA1A-209ENST00000552924 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
TUBA1A-209ENST00000552924 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
TUBA1A-209ENST00000552924 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
TUBA1A-209ENST00000552924 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
TUBA1A-209ENST00000552924 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
TUBA1A-209ENST00000552924 WIZO95785 1651 aa24.69■■□□□ 1.54
TUBA1A-209ENST00000552924 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
TUBA1A-209ENST00000552924 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
TUBA1A-209ENST00000552924 NESP48681 1621 aa24.43■■□□□ 1.5
TUBA1A-209ENST00000552924 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
TUBA1A-209ENST00000552924 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.49
TUBA1A-209ENST00000552924 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
TUBA1A-209ENST00000552924 CUX2O14529 1486 aa24.19■■□□□ 1.46
TUBA1A-209ENST00000552924 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
TUBA1A-209ENST00000552924 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
TUBA1A-209ENST00000552924 CFTRP13569 1480 aa24.18■■□□□ 1.46
TUBA1A-209ENST00000552924 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
TUBA1A-209ENST00000552924 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
TUBA1A-209ENST00000552924 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
TUBA1A-209ENST00000552924 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
TUBA1A-209ENST00000552924 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
TUBA1A-209ENST00000552924 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
TUBA1A-209ENST00000552924 WDR62O43379 1518 aa23.89■■□□□ 1.41
TUBA1A-209ENST00000552924 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
TUBA1A-209ENST00000552924 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
TUBA1A-209ENST00000552924 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
TUBA1A-209ENST00000552924 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
TUBA1A-209ENST00000552924 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
TUBA1A-209ENST00000552924 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
TUBA1A-209ENST00000552924 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
TUBA1A-209ENST00000552924 SOGA1O94964 1423 aa23.43■■□□□ 1.34
TUBA1A-209ENST00000552924 CUX1P39880 1505 aa23.42■■□□□ 1.34
TUBA1A-209ENST00000552924 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.34
TUBA1A-209ENST00000552924 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
TUBA1A-209ENST00000552924 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
TUBA1A-209ENST00000552924 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
TUBA1A-209ENST00000552924 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
TUBA1A-209ENST00000552924 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.32
TUBA1A-209ENST00000552924 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
TUBA1A-209ENST00000552924 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
TUBA1A-209ENST00000552924 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
TUBA1A-209ENST00000552924 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
TUBA1A-209ENST00000552924 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
TUBA1A-209ENST00000552924 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.3
TUBA1A-209ENST00000552924 FBLN2P98095 1184 aa23.19■■□□□ 1.3
TUBA1A-209ENST00000552924 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
TUBA1A-209ENST00000552924 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
TUBA1A-209ENST00000552924 GRIN2BQ13224 1484 aa23.14■■□□□ 1.29
TUBA1A-209ENST00000552924 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
TUBA1A-209ENST00000552924 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
TUBA1A-209ENST00000552924 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
TUBA1A-209ENST00000552924 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
TUBA1A-209ENST00000552924 ABCA5Q8WWZ7 1642 aa23.01■■□□□ 1.27
TUBA1A-209ENST00000552924 PBRM1Q86U86 1689 aa23■■□□□ 1.27
TUBA1A-209ENST00000552924 CHD1O14646 1710 aa22.99■■□□□ 1.27
TUBA1A-209ENST00000552924 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
TUBA1A-209ENST00000552924 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
TUBA1A-209ENST00000552924 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
TUBA1A-209ENST00000552924 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
TUBA1A-209ENST00000552924 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
TUBA1A-209ENST00000552924 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
TUBA1A-209ENST00000552924 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
TUBA1A-209ENST00000552924 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
TUBA1A-209ENST00000552924 IGF1RP08069 1367 aa22.76■■□□□ 1.23
TUBA1A-209ENST00000552924 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
TUBA1A-209ENST00000552924 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
TUBA1A-209ENST00000552924 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
TUBA1A-209ENST00000552924 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
TUBA1A-209ENST00000552924 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
TUBA1A-209ENST00000552924 NUP160Q12769 1436 aa22.68■■□□□ 1.22
TUBA1A-209ENST00000552924 CUL7Q14999 1698 aa22.68■■□□□ 1.22
TUBA1A-209ENST00000552924 CARMIL1Q5VZK9 1371 aa22.67■■□□□ 1.22
TUBA1A-209ENST00000552924 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
TUBA1A-209ENST00000552924 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
TUBA1A-209ENST00000552924 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
TUBA1A-209ENST00000552924 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
TUBA1A-209ENST00000552924 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 544.2 ms