RNA–Protein interactions for RNA: ENST00000552920.1

RNFT2-207, Transcript of ring finger protein, transmembrane 2, humanhuman

TSL 4

Gene RNFT2, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2-207ENST00000552920 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
RNFT2-207ENST00000552920 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
RNFT2-207ENST00000552920 ABCC9O60706 1549 aa20.6■□□□□ 0.89
RNFT2-207ENST00000552920 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
RNFT2-207ENST00000552920 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
RNFT2-207ENST00000552920 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
RNFT2-207ENST00000552920 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
RNFT2-207ENST00000552920 NACADO15069 1562 aa19.94■□□□□ 0.78
RNFT2-207ENST00000552920 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
RNFT2-207ENST00000552920 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
RNFT2-207ENST00000552920 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
RNFT2-207ENST00000552920 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
RNFT2-207ENST00000552920 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
RNFT2-207ENST00000552920 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
RNFT2-207ENST00000552920 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
RNFT2-207ENST00000552920 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
RNFT2-207ENST00000552920 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
RNFT2-207ENST00000552920 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
RNFT2-207ENST00000552920 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
RNFT2-207ENST00000552920 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
RNFT2-207ENST00000552920 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
RNFT2-207ENST00000552920 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
RNFT2-207ENST00000552920 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
RNFT2-207ENST00000552920 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
RNFT2-207ENST00000552920 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
RNFT2-207ENST00000552920 WIZO95785 1651 aa18.48■□□□□ 0.55
RNFT2-207ENST00000552920 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
RNFT2-207ENST00000552920 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
RNFT2-207ENST00000552920 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
RNFT2-207ENST00000552920 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
RNFT2-207ENST00000552920 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
RNFT2-207ENST00000552920 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
RNFT2-207ENST00000552920 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
RNFT2-207ENST00000552920 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
RNFT2-207ENST00000552920 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
RNFT2-207ENST00000552920 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
RNFT2-207ENST00000552920 CFTRP13569 1480 aa17.87■□□□□ 0.45
RNFT2-207ENST00000552920 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
RNFT2-207ENST00000552920 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
RNFT2-207ENST00000552920 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
RNFT2-207ENST00000552920 CUX2O14529 1486 aa17.77■□□□□ 0.44
RNFT2-207ENST00000552920 NESP48681 1621 aa17.74■□□□□ 0.43
RNFT2-207ENST00000552920 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
RNFT2-207ENST00000552920 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
RNFT2-207ENST00000552920 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
RNFT2-207ENST00000552920 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
RNFT2-207ENST00000552920 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
RNFT2-207ENST00000552920 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
RNFT2-207ENST00000552920 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
RNFT2-207ENST00000552920 CUX1P39880 1505 aa17.47■□□□□ 0.39
RNFT2-207ENST00000552920 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
RNFT2-207ENST00000552920 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
RNFT2-207ENST00000552920 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
RNFT2-207ENST00000552920 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
RNFT2-207ENST00000552920 MRC2Q9UBG0 1479 aa17.45■□□□□ 0.38
RNFT2-207ENST00000552920 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
RNFT2-207ENST00000552920 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
RNFT2-207ENST00000552920 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
RNFT2-207ENST00000552920 WDR62O43379 1518 aa17.38■□□□□ 0.37
RNFT2-207ENST00000552920 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
RNFT2-207ENST00000552920 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
RNFT2-207ENST00000552920 SOGA1O94964 1423 aa17.26■□□□□ 0.35
RNFT2-207ENST00000552920 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
RNFT2-207ENST00000552920 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
RNFT2-207ENST00000552920 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
RNFT2-207ENST00000552920 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
RNFT2-207ENST00000552920 EEA1Q15075 1411 aa17.19■□□□□ 0.34
RNFT2-207ENST00000552920 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
RNFT2-207ENST00000552920 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
RNFT2-207ENST00000552920 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
RNFT2-207ENST00000552920 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
RNFT2-207ENST00000552920 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
RNFT2-207ENST00000552920 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
RNFT2-207ENST00000552920 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
RNFT2-207ENST00000552920 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
RNFT2-207ENST00000552920 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
RNFT2-207ENST00000552920 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
RNFT2-207ENST00000552920 IGF1RP08069 1367 aa17.02■□□□□ 0.32
RNFT2-207ENST00000552920 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
RNFT2-207ENST00000552920 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
RNFT2-207ENST00000552920 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
RNFT2-207ENST00000552920 PBRM1Q86U86 1689 aa17■□□□□ 0.31
RNFT2-207ENST00000552920 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
RNFT2-207ENST00000552920 CUL7Q14999 1698 aa16.97■□□□□ 0.31
RNFT2-207ENST00000552920 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
RNFT2-207ENST00000552920 KIF21BO75037 1637 aa16.95■□□□□ 0.3
RNFT2-207ENST00000552920 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
RNFT2-207ENST00000552920 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
RNFT2-207ENST00000552920 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
RNFT2-207ENST00000552920 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
RNFT2-207ENST00000552920 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
RNFT2-207ENST00000552920 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
RNFT2-207ENST00000552920 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
RNFT2-207ENST00000552920 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
RNFT2-207ENST00000552920 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
RNFT2-207ENST00000552920 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
RNFT2-207ENST00000552920 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
RNFT2-207ENST00000552920 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
RNFT2-207ENST00000552920 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
RNFT2-207ENST00000552920 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms