RNA–Protein interactions for RNA: ENST00000552846.1

PRR13-213, Transcript of proline rich 13, humanhuman

TSL 3

Gene PRR13, Length 407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR13-213ENST00000552846 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
PRR13-213ENST00000552846 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
PRR13-213ENST00000552846 ABCC9O60706 1549 aa21.44■■□□□ 1.02
PRR13-213ENST00000552846 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
PRR13-213ENST00000552846 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
PRR13-213ENST00000552846 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
PRR13-213ENST00000552846 NACADO15069 1562 aa20.87■□□□□ 0.93
PRR13-213ENST00000552846 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
PRR13-213ENST00000552846 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
PRR13-213ENST00000552846 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
PRR13-213ENST00000552846 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
PRR13-213ENST00000552846 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
PRR13-213ENST00000552846 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
PRR13-213ENST00000552846 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRR13-213ENST00000552846 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
PRR13-213ENST00000552846 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
PRR13-213ENST00000552846 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
PRR13-213ENST00000552846 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
PRR13-213ENST00000552846 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
PRR13-213ENST00000552846 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
PRR13-213ENST00000552846 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
PRR13-213ENST00000552846 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
PRR13-213ENST00000552846 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
PRR13-213ENST00000552846 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
PRR13-213ENST00000552846 SMARCA2P51531 1590 aa19.27■□□□□ 0.67
PRR13-213ENST00000552846 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
PRR13-213ENST00000552846 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
PRR13-213ENST00000552846 WIZO95785 1651 aa19.11■□□□□ 0.65
PRR13-213ENST00000552846 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
PRR13-213ENST00000552846 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
PRR13-213ENST00000552846 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
PRR13-213ENST00000552846 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
PRR13-213ENST00000552846 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
PRR13-213ENST00000552846 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
PRR13-213ENST00000552846 CFTRP13569 1480 aa18.66■□□□□ 0.58
PRR13-213ENST00000552846 NESP48681 1621 aa18.64■□□□□ 0.57
PRR13-213ENST00000552846 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
PRR13-213ENST00000552846 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
PRR13-213ENST00000552846 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
PRR13-213ENST00000552846 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
PRR13-213ENST00000552846 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
PRR13-213ENST00000552846 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
PRR13-213ENST00000552846 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
PRR13-213ENST00000552846 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
PRR13-213ENST00000552846 WDR62O43379 1518 aa18.3■□□□□ 0.52
PRR13-213ENST00000552846 CUX2O14529 1486 aa18.27■□□□□ 0.52
PRR13-213ENST00000552846 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
PRR13-213ENST00000552846 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
PRR13-213ENST00000552846 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
PRR13-213ENST00000552846 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
PRR13-213ENST00000552846 CUX1P39880 1505 aa18.14■□□□□ 0.49
PRR13-213ENST00000552846 WRNQ14191 1432 aaPredicted RBP eCLIP18.09■□□□□ 0.49
PRR13-213ENST00000552846 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
PRR13-213ENST00000552846 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
PRR13-213ENST00000552846 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
PRR13-213ENST00000552846 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
PRR13-213ENST00000552846 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
PRR13-213ENST00000552846 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
PRR13-213ENST00000552846 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
PRR13-213ENST00000552846 SOGA1O94964 1423 aa17.95■□□□□ 0.46
PRR13-213ENST00000552846 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
PRR13-213ENST00000552846 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
PRR13-213ENST00000552846 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
PRR13-213ENST00000552846 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
PRR13-213ENST00000552846 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.44
PRR13-213ENST00000552846 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.443e-8■■■■■ 43.4
PRR13-213ENST00000552846 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
PRR13-213ENST00000552846 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
PRR13-213ENST00000552846 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
PRR13-213ENST00000552846 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
PRR13-213ENST00000552846 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
PRR13-213ENST00000552846 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
PRR13-213ENST00000552846 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
PRR13-213ENST00000552846 ERICH3Q5RHP9 1530 aa17.69■□□□□ 0.42
PRR13-213ENST00000552846 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
PRR13-213ENST00000552846 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
PRR13-213ENST00000552846 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
PRR13-213ENST00000552846 IGF1RP08069 1367 aa17.64■□□□□ 0.41
PRR13-213ENST00000552846 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
PRR13-213ENST00000552846 ADAMTS12P58397 1594 aa17.6■□□□□ 0.41
PRR13-213ENST00000552846 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
PRR13-213ENST00000552846 FHAD1B1AJZ9 1412 aa17.58■□□□□ 0.41
PRR13-213ENST00000552846 EEA1Q15075 1411 aa17.55■□□□□ 0.4
PRR13-213ENST00000552846 CUL7Q14999 1698 aa17.54■□□□□ 0.4
PRR13-213ENST00000552846 CHD1O14646 1710 aa17.52■□□□□ 0.39
PRR13-213ENST00000552846 GRIN2AQ12879 1464 aa17.51■□□□□ 0.39
PRR13-213ENST00000552846 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
PRR13-213ENST00000552846 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
PRR13-213ENST00000552846 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
PRR13-213ENST00000552846 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
PRR13-213ENST00000552846 NUP160Q12769 1436 aa17.47■□□□□ 0.39
PRR13-213ENST00000552846 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
PRR13-213ENST00000552846 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
PRR13-213ENST00000552846 FBLN2P98095 1184 aa17.42■□□□□ 0.38
PRR13-213ENST00000552846 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
PRR13-213ENST00000552846 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
PRR13-213ENST00000552846 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
PRR13-213ENST00000552846 KIAA0586Q9BVV6 1533 aa17.34■□□□□ 0.37
PRR13-213ENST00000552846 KIF21BO75037 1637 aa17.33■□□□□ 0.37
PRR13-213ENST00000552846 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms